Variovorax boronicumulans: CKY39_26570
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Entry
CKY39_26570 CDS
T05068
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
vbo
Variovorax boronicumulans
Pathway
vbo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vbo00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CKY39_26570
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vbo02000
]
CKY39_26570
Transporters [BR:
vbo02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
CKY39_26570
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_6
SBP_bac_11
SBP_bac_1
Motif
Other DBs
NCBI-ProteinID:
ATA56401
UniProt:
A0A250DQN1
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All DBs
Position
5760188..5761201
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AA seq
337 aa
AA seq
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MSLRFHRLARLGVLAAALVAAGGAMAQTAICYNCPTEWADWGTQLKAIKAKTGITVPADN
KNSGQSLAQLVAEKASPVADVTYLGVTFAVQAAKDGVVEPYKPAAWKDIPDGLKDPAGNW
FTIHSGTLGFMVNVDALKGKPVPKSWADLLKPEYKGLIGYLDPASAFVGYVGAVAVNQAR
GGTLDNFKPAIDYFKALQKNEPIVPKQTSYARVLSGEIAILLDYDFNAYRAKYKDKANVA
FVIPSEGTLAVPYVMSLVAKAPHAADAKKVLDFTLSDEGQAIWAKAYLRPVRASAMPKEI
EAQFLPASDYARAKTVDYARMADAQRAFSDQYLKEVR
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgcgctttcaccgcctcgcccgcctcggcgtgctggccgccgccctcgtcgcc
gccggcggcgccatggcccagaccgccatttgctacaactgcccgaccgaatgggccgac
tggggcacccagctcaaggccatcaaggccaagaccggcatcaccgtgccggccgacaac
aagaactcgggccagtcgctcgcacagctggtcgccgaaaaggccagccccgtggccgac
gtgacctacctgggcgtgaccttcgcggtgcaggccgcgaaagacggcgtggtcgagccc
tacaagccggccgcctggaaagacattcccgacggcctgaaggaccccgcaggcaactgg
ttcaccatccactcgggcacgctcggcttcatggtcaacgtcgacgcactcaagggcaag
ccggtgcccaagtcgtgggccgacctgctcaagcccgagtacaagggcctcatcggctac
ctcgaccccgcctcggccttcgtgggctacgtgggcgccgtggccgtcaaccaggcgcgc
ggcggcacgctcgacaacttcaagccggccatcgactacttcaaggcgctgcagaagaac
gagcccatcgtgcccaagcagacctcgtacgcgcgcgtgctgtcgggcgagatcgcgatc
ctgctcgactacgacttcaacgcctaccgcgccaagtacaaggacaaggccaacgtcgcc
ttcgtcatcccgagcgaaggcacgctggccgtgccctacgtgatgagcctggtcgccaag
gcgccgcacgcggccgatgccaagaaggtgctcgacttcacgctgtccgacgaaggccag
gcgatctgggccaaggcctacctgcgccctgtgcgcgcgagcgccatgcccaaggagatc
gaggcgcagttcctgcccgccagcgactacgcccgtgccaagaccgtcgactacgcccgc
atggccgacgcgcagcgcgccttctccgaccagtacctgaaggaagtgcgctga
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