Variovorax boronicumulans: CKY39_26580
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Entry
CKY39_26580 CDS
T05068
Name
(GenBank) ABC transporter permease
KO
K02053
putative spermidine/putrescine transport system permease protein
Organism
vbo
Variovorax boronicumulans
Pathway
vbo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vbo00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CKY39_26580
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vbo02000
]
CKY39_26580
Transporters [BR:
vbo02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
CKY39_26580
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GFIT
Motif
Pfam:
BPD_transp_1
Phage_zn_bind_8
Motif
Other DBs
NCBI-ProteinID:
ATA56403
UniProt:
A0A250DR24
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Position
5762057..5762857
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AA seq
266 aa
AA seq
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MKTPSQPRAPFLLAVTVIVSLFMIAPMLLSVMAGLVNNYSAGLKSGLTLRWLGEVWENYG
GTVGWSLALAVACVVCTVLIGVPCAYTLARSRSRAARIFEELLTLPVAVPGLATALALIL
AYGQLTAFRQSFAFILVGHIVFTLPFMVRTVSSAFQRDDLLALEEAARSLGANFRQRFMG
ILVPAVFPAIVAGSLMVFTLSVGEFNLTWMLHTPLTRTLPVGLADSYASMRIEIGSAYTL
VFFAVILPVLWGLQYLANLMQKRHGT
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccccttcgcaaccccgcgcccccttcctgctcgccgtcacggtgatcgtgagc
ctcttcatgatcgcgccgatgctgctgtcggtgatggccggcctcgtcaacaactacagc
gcgggcctgaagagcggcctcacgctgcgctggctgggcgaggtgtgggagaactacggc
ggcaccgtcggctggtcgctcgcgctggccgtggcctgcgtcgtgtgcaccgtgctgatc
ggcgtgccctgcgcctacacgctggcgcgcagccgctcgcgcgcggcgcgcatcttcgaa
gaactgctgaccctgccggtcgcggtgccgggcctggcgacggcgctcgcgctcatcctc
gcctacggccagctcacggccttccgccagagcttcgccttcatcctcgtgggccacatc
gtcttcacgctgcccttcatggtgcgcaccgtgagctcggccttccagcgcgacgacctg
ctcgcgctcgaagaggccgcgcgctcgctgggcgcgaacttccgccagcgcttcatgggc
atcctcgtgcccgccgtgttcccggccatcgtggccggcagcctgatggtgttcacgctg
tcggtgggtgaattcaacctcacctggatgctgcacacgccgctcacgcgcacgctgccc
gtgggcctggccgacagctacgcctcgatgcgcatcgagatcggatcggcctacacgctg
gtcttcttcgcagtgatccttcccgtgctgtggggcctgcagtaccttgccaacctgatg
cagaaacgccatggaacttga
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