Variovorax boronicumulans: CKY39_26660
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Entry
CKY39_26660 CDS
T05068
Name
(GenBank) TetR family transcriptional regulator
KO
K09017
TetR/AcrR family transcriptional regulator
Organism
vbo
Variovorax boronicumulans
Brite
KEGG Orthology (KO) [BR:
vbo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vbo03000
]
CKY39_26660
Transcription factors [BR:
vbo03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
CKY39_26660
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_3
TetR_N
TetR_C_9
TetR_C_29
Motif
Other DBs
NCBI-ProteinID:
ATA56415
UniProt:
A0A250DPW1
LinkDB
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Position
complement(5777715..5778452)
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AA seq
245 aa
AA seq
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MSAAPPLRTAARPPAVKRQARRQNLESAILAVAQERFALHGYGGVSVDDIAADAGISKQS
LLYYFPSKKALYSRVFNDVLDSWLSNLNSLADADLDPHAALERYVTQKLQFSYDHPSGSR
LFAQEIISQAPQCADDIEAKLVPAFRAEAAVLNRWMANGDVAPLPVPHLLFTLWAMTQTY
ADFAWQMRMLLGKQALEPADFDLARETILRMLEGALGLKRPATSAVVTSGHAALPPLEKA
GKAGA
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccgcgccacccctgcgaacggcggcgcgtcctcccgccgtgaagcgccaggcc
cgccgccagaacctcgagagcgccatcctcgcagtggcgcaggaacgcttcgcgctgcac
ggctacggcggcgtgtcggtcgacgacatcgcggccgacgcgggcatctccaagcagagc
ctgctgtactacttcccctcgaagaaggcgctgtacagccgcgtgttcaacgacgtgctc
gactcgtggctgtcgaacctcaacagcctggccgacgccgacctcgacccgcatgccgcg
ctggagcgctacgtcacgcagaagctgcagttctcgtacgaccacccttcgggctcgcgg
ctgttcgcgcaggaaatcatttctcaggcgccgcaatgcgccgacgacatcgaggccaag
ctggtaccagccttccgcgccgaagcggccgtgctgaaccgctggatggcgaacggcgac
gtggcgccgctgcccgtgccgcacctgctgttcacgctgtgggccatgacgcagacctat
gccgacttcgcctggcagatgcggatgctgcttggcaagcaggcgctggagccggcggat
ttcgatctggcccgcgagaccatcttgcggatgctcgaaggtgcgctgggactgaagcgg
cccgccacgtcagcggtggtgacgagcgggcacgccgcgctgcctcccttggaaaaggcc
gggaaggccggggcctag
DBGET
integrated database retrieval system
