Variovorax boronicumulans: CKY39_26795
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Entry
CKY39_26795 CDS
T05068
Symbol
hemN
Name
(GenBank) oxygen-independent coproporphyrinogen III oxidase
KO
K02495
oxygen-independent coproporphyrinogen III oxidase [EC:
1.3.98.3
]
Organism
vbo
Variovorax boronicumulans
Pathway
vbo00860
Porphyrin metabolism
vbo01100
Metabolic pathways
vbo01110
Biosynthesis of secondary metabolites
vbo01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
vbo00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
CKY39_26795 (hemN)
Enzymes [BR:
vbo01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.98 With other, known, physiological acceptors
1.3.98.3 coproporphyrinogen dehydrogenase
CKY39_26795 (hemN)
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Motif
Pfam:
Radical_SAM
HemN_C
Motif
Other DBs
NCBI-ProteinID:
ATA56441
UniProt:
A0A250DQS5
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Position
complement(5803188..5804594)
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AA seq
468 aa
AA seq
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MSLPLAGVADTPSVLPVELLRRFDVPGPRYTSYPTADRFVETFGTGDYAQALHLRRDADT
AGEPLSLYVHIPFCESLCYYCACNKVVTKHRERGRQYLDYLAREVALQVAQLGPGAPVGQ
LHLGGGTPTFLDDEELGELVALLRRAFAFVPGGEQSIEIDPRTVDAQRLAALAALGFNRL
SFGVQDFDPDVQQAVHRIQPAAQVFALMDAARTLGFKSINVDLIYGLPRQNDASFERTLA
QIRELRPDRIALYAYAHLPERFKPQRRIAAEELPDAPTRVRMLGRAIAALSEAGYVYIGM
DHFALPDDPLAVAKREGRLHRDFQGYSTQPDGDLVALGVSAIGRVGATYSQNAKTLEDYY
ALLDQGRLPVVKGLALSDDDVLRREVIMALMCRGRVDFDAVEAAHGIAFADYFAPERAAL
VPMAEQGLVRLSPRAIEVTEAGWFLVRAVAMVFDRYCAATRTRFSRVV
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgagcttgcccctggccggcgttgccgacaccccgtccgtgctgcccgtcgagctgctg
cgccgcttcgacgtgcccggcccgcgctacacctcgtaccccacggccgaccgcttcgtc
gagaccttcggcactggcgactacgcgcaggcgctgcatctgcggcgtgatgcggacacg
gccggcgaaccgctgtcgctgtacgtgcacatcccgttctgcgaatcgctgtgctactac
tgcgcctgcaacaaggtcgtcaccaagcaccgcgagcgcgggcggcagtacctcgactac
ctggcgcgcgaagtggcgctgcaggtcgcgcagctcggacccggtgcgcccgtcggccag
ctgcacctgggcggcggcacgccgaccttcctggacgatgaggaactgggcgaactggtg
gccctgctgcgccgcgcgttcgccttcgtgccgggcggcgagcagtcgatcgagatcgat
ccgcgcaccgtcgatgcacagcgcctcgcggcgctggccgcgctcggcttcaaccgcctg
agcttcggcgtgcaggacttcgaccccgacgtgcagcaggccgtgcaccgcatccagccg
gcggcgcaggtcttcgcgctgatggatgcggcgcgcacgctgggtttcaaatcgatcaac
gtcgacctgatctacggcctgccgcgccagaacgatgcctcgttcgagcgcacgctcgcg
cagatccgcgagctgcggcccgaccgcatcgcgctgtatgcctatgcgcacctgccggag
cgcttcaagccgcagcggcgcatcgcggccgaagaattgcccgatgcccccacgcgcgtg
cgcatgctcgggcgcgcgatcgcggcgctcagcgaggccggctacgtctacatcggcatg
gaccacttcgcgctgcccgacgacccgttggccgtggccaagcgcgagggccggctgcac
cgcgacttccagggctacagcacgcagcccgacggtgacctcgtggcgctcggcgtgtcg
gccatcggccgcgtgggcgcgacctacagccagaacgcgaagacgctggaggactactac
gcgctgctcgaccagggccgcctgcccgtggtcaaggggctcgcgctgtcggacgacgac
gtgctgcgccgcgaggtcatcatggcgctgatgtgccggggccgcgtggacttcgacgcc
gtcgaggcggcgcacggcatcgcctttgcggactatttcgcccctgagcgtgccgcgctg
gtgccgatggccgagcaggggctggtgcgcctgtcgccacgcgccatcgaggtcaccgag
gccggctggttcctcgtgcgcgcggtggcgatggtgttcgaccgttactgcgccgcgacg
cgtacgcgtttttcgcgcgtggtttag
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