Variovorax boronicumulans: CKY39_26900
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Entry
CKY39_26900 CDS
T05068
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
vbo
Variovorax boronicumulans
Brite
KEGG Orthology (KO) [BR:
vbo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vbo02000
]
CKY39_26900
Transporters [BR:
vbo02000
]
Other transporters
Pores ion channels [TC:
1
]
CKY39_26900
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
STN
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
ATA56460
UniProt:
A0A250DQ20
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Position
complement(5823450..5825942)
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AA seq
830 aa
AA seq
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MNRTAPRTGLPPQKKRTYGALRPWVIGGAWALASGMAAHAQTQAPPQGFDVSGGDLKTAL
DAYIAQGGVQLLYKVDDVKGVATRGVKGALSPQDALARLLEGTPLQTRRGDDGAIVIYTA
AAAKPQADEAPQSLDSVTITATRRREPVREIPMQVNVMKAQALERAGAKNLADYVAEQPG
VNLTSSGSVGGTLTMRGLTTGPVQGIATVGVYVDDVATGMSSAGASGGNTPLDMGMLDLS
HIEVLRGPQGTLYGAGAMSGVLKYVTNQPDTMEFAGSVKLGTSWTQGGGPGFTTGAVLNV
PLKEDVAAVRFAAFTDQFGGSYDATGLARGRNIDRGHTDGGRVSLLLTPTRELTVRLTGT
VQDVHRKGLGFEDMDQRTLRPWTRERTRQLSANESYSNLTQLFGLDVEYDFGWARLNSIT
SAQDVKINNTVDVTGRYGPMLSALRLPVASVPVNSAVEQHRVSQEFRLTSRSGTTIEWLA
GLYLNRERGSNNGVMDANLIGGRSLGLLTSTQSSRYREEAAYGDVTWNVTPKFSLTGGVR
LARNNQKYASRQTGQLIGSVAASAAGTSSESPTTYLAAAKYTLSDTSTMYFRAASGYRPG
GPNVLKADTDRNVVQPMYNSDSLWSYELGYKADLLDRTLSLEAALYDIEWTGVQQPTRSG
AFVFVTNAGAARIKGREVTLNWKPSKEWRFTANAAAVDARLTEDAKGLGAKAGARLPHTP
RFAATLGVTRNFSLADHPAYVGISARYTGKRDAGYRGSTAIPSINMPAYTLVDLQAGIDF
KRFSVSAYVRNLTNKRGIVSIETGLNANPNLVTAALVPARTIGVNVNVPF
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgcaccgcgccccgcaccggcctgccgccccagaagaagcgaacgtacggcgca
ctgcgcccgtgggtcatcggcggcgcgtgggcgctggccagcggcatggccgcgcacgcg
cagacgcaggccccgccgcagggcttcgacgtgagcggtggcgatctcaagaccgcgctc
gacgcctacatcgcgcagggcggcgtgcagctgctctacaaggtcgacgacgtgaagggc
gtggccacgcgcggcgtgaagggcgcgctgtcgccgcaggacgcgctggcgcggctgctc
gaaggcacgccgctgcagacgcgccgcggtgacgacggcgccatcgtgatctacacggcc
gcggctgcgaagccgcaggccgacgaggcgccgcagtcgctcgacagcgtcaccatcacc
gccacgcgccgccgcgagccggtgcgcgagatcccgatgcaggtcaacgtgatgaaggcc
caggcgctggagcgcgcgggcgccaagaacctggccgactacgtggccgagcagccgggc
gtgaacctcaccagcagcggcagcgtgggcggcacgctcaccatgcgcgggctgaccacc
ggcccggtgcagggcatcgcgaccgtgggcgtgtacgtggacgacgtggccaccggcatg
agctcggccggcgcgagcggtggcaacacgccgctggacatgggcatgctcgacctgagc
cacatcgaggtgctgcgcggcccgcagggcacgctgtacggcgcgggcgccatgagcggc
gtgctcaagtacgtgaccaaccagcccgacaccatggagttcgcgggctcggtgaagctg
ggcacctcgtggacgcagggcggcggtccgggcttcacgaccggcgcggtgctcaacgtg
ccgctcaaggaagacgtggcggccgtgcgcttcgcagccttcaccgaccagttcggcggc
agctacgacgccacgggcctggcgcgcgggcgcaacatcgaccgcggccacaccgacggc
ggccgggtctcgctgctgctcacgcccacgcgcgaactcacggtgcgcctcacgggcacc
gtgcaggacgtgcatcgcaagggcctgggcttcgaggacatggaccagcgcacgctgcgc
ccctggacgcgggagcgcacgcgccagctgtcggccaacgagtcgtacagcaacctcacg
cagctgttcgggctggacgtggaatacgacttcggctgggcccgcctgaactcgatcacc
tccgcgcaggacgtgaagatcaacaacaccgtcgacgtcaccggccgctacgggccgatg
ctgagcgcgctgcgcctgccggtggcctcggtgccggtgaacagtgccgtggagcagcac
cgcgtcagccaggagttccgcctgacctcgcgctcgggcaccaccatcgagtggctggcg
ggcctgtacctgaaccgcgaacgcggcagcaacaacggcgtcatggacgccaacctgatc
gggggccgcagcctcggcctgctgacctcgacgcagtcctcgcgctaccgcgaggaagcg
gcctacggcgacgtcacctggaacgtgacgcccaagttctcgctcaccggcggcgtgcgc
ctggcgcgcaacaaccagaagtacgccagccgccagaccggccagctcatcgggtcggtc
gccgccagtgccgccggcacctcgtcggaaagcccgaccacctacctggccgcggccaag
tacacgctgtcggacacgagcaccatgtacttccgcgcggccagcggctaccgccccggc
ggtcccaacgtgctcaaggccgacaccgaccgcaacgtggtgcagccgatgtacaactcc
gactcgctgtggagctacgagctgggctacaaggccgacctgctggaccgtacgctgtcg
ctggaggcggcgctgtacgacatcgagtggaccggcgtgcagcagcccacgcgcagcggc
gccttcgtgttcgtcaccaacgcgggcgcggcccgcatcaagggccgcgaggtcacgctc
aactggaagcccagcaaggaatggcgcttcaccgccaatgccgcggccgtcgatgcgcgc
ctgaccgaggacgccaagggcctgggcgccaaggccggcgcgcgcctgccgcacacgccg
cgctttgccgccacgctgggcgtgacgcgcaacttcagcctcgccgaccacccggcctac
gtcggcatcagcgcgcgctacaccggcaagcgcgatgcgggctaccgcggcagcacggcc
attccgagcatcaacatgccggcctacacgctggtcgacctgcaggcgggcatcgacttc
aagcgcttcagcgtctcggcctacgtgcgcaacctgacgaacaagcgcggcatcgtgtcg
atcgaaaccggactcaacgcgaacccgaacctggtgaccgcggcgctcgtgccggcacgc
accatcggcgtgaacgtcaacgttccgttctga
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