Variovorax boronicumulans: CKY39_26920
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Entry
CKY39_26920 CDS
T05068
Name
(GenBank) diguanylate cyclase
Organism
vbo
Variovorax boronicumulans
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GGDEF
PAS_4
dCache_1
PAS_8
PAS
PAS_9
Cache_3-Cache_2
PAS_3
dCache_2
BTAD
MCP-like_PDC_1
Motif
Other DBs
NCBI-ProteinID:
ATA56463
UniProt:
A0A250DR88
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Position
5828440..5831163
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AA seq
907 aa
AA seq
DB search
MKLFATAKRRISLNTRLSVGVAAVVLATTFIIATVALHLVKSRMQASIANEEFARLSAIA
SAVEQKFASRRILLKTIAESVGSHGITNAAPLQAFLEKHQSLRAAFDNVAFLDTDGELVA
NLNGARQIGKVNVKDRAYFKDTVAARTGVISEPYRNRLNGLAQVAITEPVLDAAGRVLFV
ISGSINLKDRNILGELADVRFGQTGYVFITTADGIVIDHPLADRVLKQANMAMADDAPDL
DRAIGGFEGTIEGVNHAGVPGLYAFKRIRQADWIMGSMYPRHEAFARIEAIERTAWIGAI
VLALLAGALALAVVRQQLRPLTGLHRHMLDAHAAPAQAAVARTYPDDEIGDLSRTFDRLM
QQHQASEKFLRDITDNLPAMISHADAQGRYTFVNARLCEELGYSAEELVGQPVQSMSGLH
DDPTLEHNLRRVLAGEAVSFERRGAAHRDEEEHFFQTDFIPELDAQGRVCGYYAMTFDIT
QRKHIELELAHSEAQIRTIADNIPALVSHVDAALYYTFVNAKVRTLHHGQPLVGQWMPAV
RGAADFAVVRPHMERALAGETVIVEKAGDAALGIGDRTFKAHYIPDQDAEGMVHGVFAMT
FDITDEVNIRRALTQQEKRLRDVTDNIPALVAYFDRDENCLYGNSRARRMAGLDERAPLD
GVTLRSAVGEAVYVQHTPHLPTVLAGRATQYPVQVPIDDREAHFQVNLIPDKDLAGHTAG
FYLMTFNVTALKEAERKLIELARMDVLTGLPNRLAFNEQLPAAMSRVRRAEGGMALMFLD
IDHFKAINDTLGHSTGDGVLAEYARRLRASVRETDTVVRLAGDEFVIVLENVHSQDAVAG
VAHKIVSQIAAPAFPVEGRRLDVTTSIGIVFVETVDATVGAGELLARADTALYAAKSQGR
NRFAFYR
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcttcgcgaccgcgaaacgccgcatcagcctgaacacgcgcctcagcgtcggc
gttgcggccgtcgtgctggccaccaccttcatcatcgccacggtggcgctgcacctggtc
aagagccgcatgcaggcctcgatcgccaacgaggagttcgcgcggctgtcggccatcgcg
agcgcggtggagcagaagttcgccagccggcgcatcctgctgaagacgatcgccgagagc
gtgggctcgcacggcatcacgaacgccgcgccgctgcaggcctttctggaaaagcaccag
tccctgcgggcggcgttcgacaacgtcgccttcctggacacggacggcgagctggtcgcc
aacctgaacggcgcgcgacagatcggcaaggtgaacgtgaaggaccgcgcgtacttcaag
gacacggtcgccgcgcgcacgggcgtgatctccgagccttaccgcaaccggctcaacggc
ctggcgcaggtcgccatcaccgagccggtgctcgatgcggccggccgggtgctgttcgtg
atctcgggctccatcaacctgaaggaccggaacatcctgggcgagctggccgacgtgcgc
ttcggccagacgggctacgtgttcatcaccaccgccgacggcatcgtgatcgaccacccg
ctggccgaccgcgtgctcaagcaggccaacatggccatggccgacgacgcgcccgacctg
gaccgcgcgatcggcggcttcgaaggcaccatcgaaggcgtcaaccatgcgggcgtgccc
ggcctgtacgccttcaagcgcatccgccaggccgactggatcatgggctcgatgtacccg
cgccacgaggcctttgcccgcatcgaagccatcgagcgcaccgcgtggatcggcgccatc
gtgctggcgctgctggccggcgcgctggcgctggccgtggtgcgccaacagctgcgcccg
ctcaccgggctgcaccgccacatgctcgacgcccacgcggcgcccgcgcaggcggccgtg
gcgcgcacctacccggacgacgaaatcggcgacctttcgcgcaccttcgaccggctcatg
cagcagcaccaggccagcgagaagttcctgcgcgacatcaccgacaacctgccggccatg
atctcgcacgccgacgcgcagggccgctacaccttcgtgaatgcgcggctgtgcgaggag
ctgggctacagcgccgaggagttggtgggccagcccgtgcagagcatgagcggcctgcac
gacgacccgacgctcgagcacaacctgcggcgcgtgctggccggcgaggccgtgtccttc
gagcggcgcggcgccgcgcaccgcgacgaggaagagcacttcttccagaccgacttcatc
cccgagctcgacgcgcaggggcgggtgtgcggctactacgcgatgaccttcgacatcacg
cagcgcaagcacatcgagctcgagctggcgcacagcgaggcgcagatccgcaccatcgcc
gacaacattcccgcgctggtctcgcacgtcgacgccgcgctgtactacaccttcgtcaat
gccaaggtgcgcacgctgcaccacggccagccgctggtgggccagtggatgccggccgtg
cggggcgcggccgatttcgcggtggtgcggccccacatggagcgcgcgctggcgggcgaa
acggtgatcgtcgagaaggccggcgacgcggcgctgggcatcggcgaccgcaccttcaag
gcccactacatccccgaccaggacgccgagggcatggtgcacggcgtgttcgcgatgacc
ttcgacatcaccgacgaagtgaacatccgccgcgccctcacgcagcaggaaaagcgcctg
cgcgacgtgaccgacaacatccccgcgctggtggcctacttcgaccgcgacgagaactgc
ctgtacggcaacagccgcgcgcggcgcatggcgggcctggacgaacgtgcgccgctggac
ggcgtgacgctgcgctcggccgtgggtgaggcggtgtacgtgcagcacacgccccacctg
cccacggtgctcgccggcagggcgacgcagtacccggtgcaggtgccgatcgatgaccgg
gaggcgcacttccaggtgaacctgattcccgacaaggacctggcgggccacacggcgggc
ttctacctcatgaccttcaacgtcacggcgctgaaggaggccgagcgcaagctcatcgag
ctggcgcgcatggacgtgctgaccggcctgccgaaccgcctggccttcaacgagcagttg
cccgcggcgatgtcgcgcgtgcgccgcgccgagggcggcatggcgctgatgttcctggac
atcgaccacttcaaggccatcaacgacacgctcggccattccaccggcgacggcgtgctg
gccgaatatgcgcgccgcctgcgcgccagcgtgcgcgagaccgacaccgtggtgcgcctg
gccggcgacgagttcgtgatcgtgctggagaacgtgcactcgcaggacgcggtggcgggc
gtggcgcacaagatcgtctcgcagatcgcggcgccggcgttccccgtggaaggccggcgg
ctggacgtcacgaccagcatcggcatcgtgttcgtcgagacggtcgatgccaccgtcggt
gccggcgaactgctcgcgcgggcggacacggcgctctacgcggccaagtcgcagggccgc
aaccgtttcgcgttttaccgttag
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