Variovorax boronicumulans: CKY39_26945
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Entry
CKY39_26945 CDS
T05068
Name
(GenBank) hypothetical protein
KO
K07347
outer membrane usher protein
Organism
vbo
Variovorax boronicumulans
Pathway
vbo02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vbo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CKY39_26945
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vbo02000
]
CKY39_26945
02044 Secretion system [BR:
vbo02044
]
CKY39_26945
02035 Bacterial motility proteins [BR:
vbo02035
]
CKY39_26945
Transporters [BR:
vbo02000
]
Other transporters
Pores ion channels [TC:
1
]
CKY39_26945
Secretion system [BR:
vbo02044
]
Chaperone-usher system
Type 1 pilus assembly protein
CKY39_26945
Bacterial motility proteins [BR:
vbo02035
]
Pilus system
Fimbrial proteins
CKY39_26945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Usher
PapC_C
Motif
Other DBs
NCBI-ProteinID:
ATA56468
UniProt:
A0A250DQ43
LinkDB
All DBs
Position
5835506..5837893
Genome browser
AA seq
795 aa
AA seq
DB search
MPPRRRPAPPCACPVRPPRHASLWVCCGWLGLRVACAQTSPADMAGEVQPAILDVRINGL
SQPAPRPLLRRGAQLLASAPDFAAWRLVRPATAALQRDGTDYYDLRALPGAQLQLDESAQ
SVDLSVPAEAFTLGTVHAHAGDRPPLSASAFGAFLNYDLALQHDREGTRASGYFDAAASG
DWGLVGTSLVAGQSAFGGRGTTRLDSYFRRDDPARLTRLTVGDTITQAAAWSTPFRFGGV
QFGTRFGLQPGFISYPMPTLRGGAAVPSAVEVYVNDTLRYQRRVDAGPFALSDVPVLTGA
GEMRFAVTDALGVQRTVTTPYYVSSNLLRAGLSDYSLEAGWTRLRYGERSFDYGPPFVAG
TWRHGVNDSVTVEARGEASARSQTAGAGVTWVWGTLGELSLHGAASRSKDGDSGRLWRAA
YTRTSDAWNFSVSRQVASRGFTQIAWHDSPVHTDAQTQLFAGRSLGRYGTLGASHTRLRY
NTGEHIGVTTASWSISLGGNAWLGTSVAHTRQDGKRSITSVNVSLSFTLGDRQHATLSVQ
HQKPGGHSAVAEWVQQPPNDTGWGYRLRAADGENARSEAAVDWRGRYGMLTAEAARAQGQ
TAVRLRASGAVGFAGAVGFATRQSDDAFALVTVPGAAGVKVYRENQPWTTTDSEGRAVVS
GLRAYEPNHISIDNGDLPIEAQVRSDVLRVVPRYKGVAQASFDIARDAIANVTVLLPDGS
PLPPGIDVMRPARGTSLLSGFNGLVSVDDPQPNERFEARWKSGHCRFTLGEPDRAAGALP
SMGPYRCEPVSPSPR
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgcccccgaggcgtcgtccagcgccaccgtgcgcgtgccccgtgcgtccgccacgccac
gctagcttgtgggtctgctgcggctggctgggcctgcgcgtggcctgcgcacagacctca
cccgctgacatggcgggcgaggtgcagcccgcgatcctcgatgtgcgcatcaacggcctg
agccagcccgcgccacggccgctcttgcggcgcggtgcgcagctgctggcatcggcgccc
gacttcgcggcctggcgcctggtgcggcccgccaccgcggcgctgcagcgcgatggcacc
gactactacgacctgcgcgcgctgccgggcgcgcagctgcagctcgacgaaagcgcgcaa
agcgtggacctgagcgtgcccgccgaggcgttcacgctgggcaccgtgcatgcgcacgcg
ggcgaccgaccgccgctgtcggcgtcggccttcggggcctttctcaactacgacctggcc
ttgcagcacgaccgcgaaggcacgcgcgcctcgggctacttcgatgcggcggcctcgggc
gactggggcctggtgggcacgagcctcgtcgccggccagtccgcgttcggcgggcgcggc
acgacgcgtctggacagctacttccgccgcgacgaccccgcgcggctcacacgcctcacg
gtgggcgacaccatcacgcaggccgccgcatggtccacgccctttcgcttcggcggcgtg
cagttcggcacccgcttcggcttgcagcccggcttcatcagctacccgatgccgaccctg
cgcggcggtgcggccgtgccgtcggcggtggaggtgtatgtgaacgacacgctgcgttat
caacgccgtgtcgatgccggccccttcgcgctcagcgacgtgcccgtgctcaccggcgcg
ggcgagatgcgcttcgccgtcaccgacgcgctcggcgtgcagcgcaccgtgaccacgccc
tactacgtgagctcgaacctgctgcgcgccgggctgtccgactactcgctcgaagccggc
tggacgcgcctgcgctacggcgagcgcagcttcgactacggcccgcccttcgtcgccggc
acctggcgccacggcgtgaacgacagcgtgaccgtcgaggcgcgcggcgaggccagtgcg
cgcagccagaccgcgggcgcgggcgtgacctgggtctggggcacactgggcgaactctcg
ctgcacggcgccgccagccgaagcaaggacggcgacagcggccgcctctggcgcgccgcc
tacacgcgcaccagcgacgcatggaacttctcggtgagccgccaggtggccagccgcggc
ttcacgcagatcgcctggcacgacagccccgtgcacaccgacgcgcagacccaactcttc
gcaggccgctcgctgggccgctatggcacgctgggcgcgagccacacgcggctgcgctac
aacaccggcgagcacatcggtgtgaccaccgccagctggtcgatcagcctcggcggcaac
gcctggctcggcacctcggtggcccacacgcgccaggacggcaagcgttccatcacctcg
gtgaacgtgagcctcagcttcacgctcggcgatcgccagcacgccacgctctcggtgcag
catcagaagccgggcggccactcggccgtggccgagtgggtgcagcagccgcccaacgac
acgggctggggctaccggctgcgcgccgccgacggcgagaacgcgcgcagcgaggccgcg
gtcgattggcgcggtcgctacggcatgctgacggccgaagccgcgcgcgcccagggccag
accgcggtgcgcctgcgcgccagcggcgccgtgggtttcgcgggcgccgtgggctttgcc
acccgccagtcggacgacgccttcgcgctcgtgaccgtgcccggcgccgccggcgtgaag
gtctaccgcgagaaccagccctggaccaccaccgacagcgaaggccgcgccgtcgtctcg
ggcctgcgtgcctacgagcccaaccacatcagcatcgacaacggcgacctgccgatcgag
gcgcaggtgcgcagcgacgtgctgcgcgtggtgccgcgctacaagggcgtggcacaggcc
agcttcgacatcgcgcgcgacgcgatcgcgaacgtcacggtgctgctgcccgacggcagc
ccgctgcctccgggcatcgacgtgatgcgaccggcgcgtggcacctcgctgctgtcgggc
ttcaacgggctggtgtcggtcgacgacccgcagccgaacgaacgcttcgaggcgcgatgg
aagagcgggcattgccgcttcacgttgggcgaacccgaccgcgccgccggcgcactgccc
tcgatgggaccttaccgatgcgaacccgtgtcgccgtccccgcgctga
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