Variovorax boronicumulans: CKY39_28015
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Entry
CKY39_28015 CDS
T05068
Name
(GenBank) hypothetical protein
KO
K02280
pilus assembly protein CpaC
Organism
vbo
Variovorax boronicumulans
Pathway
vbo02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vbo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CKY39_28015
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
vbo02044
]
CKY39_28015
02035 Bacterial motility proteins [BR:
vbo02035
]
CKY39_28015
Secretion system [BR:
vbo02044
]
Type II secretion system
Tight adherence (Tad) export apparatus
CKY39_28015
Bacterial motility proteins [BR:
vbo02035
]
Pilus system
Pilus assembly proteins
CKY39_28015
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Secretin
T2SS-T3SS_pil_N
Motif
Other DBs
NCBI-ProteinID:
ATA56650
UniProt:
A0A250DQK9
LinkDB
All DBs
Position
6050847..6052211
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AA seq
454 aa
AA seq
DB search
MTHPPRAKPNAPAHALRPTLVALCLLTPSIWPVASSVANAQAVALGAPIQFRVDAGTQKE
LLIPKGIERMAIADEAVAGVALTRQSPNSPAARLIVTGKAAGRTTLMLWEKGQSTATVYA
LEVRRRASTLTGTLDSMTAHQEARDTALAAAGEKSLLVDRSVVNVRSNTVQVEVKVVEFN
RSVLKQAGLNIFSTRANSNGFSFGSFTPASLKSATFASDGSISGEYNNPLAQAFSLLFNF
GKAGIGLNVGFLEGNGMARVLAEPTLVALSGQSASFLAGGELPVPVPQGLGTTSIEYKPF
GIGLTVTPTVLSNERIVLKVAPEASDLDYTNSLSINGVAVPAITTRRADTTVELGDGESF
IIGGLVSRTTTSNADKVPLLGDIPVLGTFFKQNRYQMSEKELVILVTPHLVKPIARNTDL
SPYLPGGAEQRDGPVWRAHLLGPASGTTVPGFSH
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaccctcctcgcgcgaagcccaacgctccggctcatgctctgcgtccaactctc
gtggcactgtgcctgttgacgccaagcatctggcccgttgcgtcctcggtagccaatgca
caagccgtcgctctgggagcgcctatccaattccgcgtcgatgcaggcacacagaaggaa
ctgctgatcccgaagggcatcgaacgcatggccattgctgacgaagcagtggccggggtg
gcgctcacacgtcaatctccgaactccccggccgcgcgcctgatcgtgaccggcaaggca
gcaggccgaactacgttgatgctctgggaaaaaggccagtcgaccgccacggtgtatgca
ctcgaagtacgccgccgcgcctcgacgctcaccggcacgctcgacagcatgaccgcgcat
caggaagcgcgggacacggcactggccgccgcgggagaaaaatccttactggttgatcgc
tccgtcgtgaacgtgcgcagcaacaccgtgcaggtcgaggtcaaggtcgtcgagttcaac
cgcagtgtgctgaagcaagccggcctcaacatcttcagcacacgagccaattccaacggg
ttcagcttcggctccttcaccccggcgtcattgaagtccgcaacattcgcctcggatgga
agcatcagcggcgaatacaacaaccctcttgcacaagccttcagcctgctgttcaacttc
ggcaaggctggtatcggattgaacgtcggttttctcgaaggcaatggcatggcgcgcgtg
ctcgccgagccaacactggtggcgctgtcgggccaaagtgcaagctttctggccggcggc
gaattgccggtacccgtgccgcaggggctgggcacgacaagcatcgaatacaagcctttc
ggcatcggcctcacagtcacacccacagtgctatcgaacgagcgcatcgtgctcaaggtg
gcaccggaagccagcgatctcgactacaccaactcgctgagcatcaacggcgtggccgtg
ccggccatcaccacgcgccgcgccgacaccacagtcgagctcggcgacggcgagagcttc
atcatcggcggcctcgtgagccgcaccaccacttcgaatgcagacaaggtgccgctgctc
ggcgacatcccggtgctcggcaccttcttcaaacagaacaggtaccagatgagcgaaaag
gaactggtcatcctcgtcacaccgcacctggtgaagccgatcgcacgcaacaccgacctg
tccccgtacctgcccggcggcgccgagcagcgcgatggtcccgtgtggcgtgcccacctc
ctggggccggcctctggcacgacagtgccgggcttctcccattga
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