Variovorax boronicumulans: CKY39_28115
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Entry
CKY39_28115 CDS
T05068
Symbol
pcaH
Name
(GenBank) protocatechuate 3,4-dioxygenase subunit beta
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
vbo
Variovorax boronicumulans
Pathway
vbo00362
Benzoate degradation
vbo00624
Polycyclic aromatic hydrocarbon degradation
vbo01100
Metabolic pathways
vbo01120
Microbial metabolism in diverse environments
vbo01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
vbo00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
CKY39_28115 (pcaH)
00624 Polycyclic aromatic hydrocarbon degradation
CKY39_28115 (pcaH)
Enzymes [BR:
vbo01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
CKY39_28115 (pcaH)
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Motif
Pfam:
Dioxygenase_C
PCDO_beta_N
CarboxypepD_reg
Motif
Other DBs
NCBI-ProteinID:
ATA56664
UniProt:
A0A250DQV4
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All DBs
Position
6078240..6078962
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AA seq
240 aa
AA seq
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MTKTSGAQPTLTPRDWDAHPSYIYPGYKSTGKRGPQKPLIPLKASLGELQQPVYGHDSIG
EFDHDLTRNARVNGEPLGERMILTGQVLDERRRPVANTLVELWQANASGRYVHKVDQHDA
PLDPNFLGAGRCLTDSEGRYRFLTIKPGAYPWGNHPNAWRPQHIHLSLFGQSFASRLVTQ
MYFPGDPLLQYDPMVTGTPERYRNRLIADFSLDITEEGYALGYQFDMVLRGADETPFENR
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagaccagtggcgcccagcccaccctcaccccgcgcgactgggacgcccatccc
agctacatctaccccggctacaagtcgaccggcaagcgcggcccgcagaagccgctcatt
ccgctgaaggcctcgctcggcgagctgcagcagccggtgtacggccacgacagcatcggc
gagttcgaccacgacctcacgcgcaacgcgcgcgtcaacggcgagccgctgggcgaacgc
atgatcctcaccggccaggtgctcgacgagcgccgccgtccggtggccaacacgctggtc
gagctgtggcaggccaacgcctcgggccgctacgtgcacaaggtcgaccagcacgacgcc
ccgctggaccccaacttcctgggcgcgggccgctgcctgaccgacagcgaaggccgctac
cgcttcctcaccatcaagcccggcgcctacccctggggcaaccacccgaacgcctggcgc
ccgcagcacatccacctgtcgctgttcggccagagcttcgccagccgcctcgtgacgcag
atgtacttccccggcgacccgctgctgcagtacgacccgatggtcaccggcacgcccgag
cgctaccgcaaccgcctcattgccgacttcagcctcgacatcaccgaggaaggctacgcc
ctgggctaccagttcgacatggtgctgcgcggcgccgatgaaacgccgttcgagaaccgc
tga
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