Variovorax boronicumulans: CKY39_28265
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Entry
CKY39_28265 CDS
T05068
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
vbo
Variovorax boronicumulans
Brite
KEGG Orthology (KO) [BR:
vbo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vbo03400
]
CKY39_28265
Enzymes [BR:
vbo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
CKY39_28265
DNA repair and recombination proteins [BR:
vbo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
CKY39_28265
Prokaryotic type
CKY39_28265
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ATA56691
UniProt:
A0A250DRG9
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All DBs
Position
6109819..6111273
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AA seq
484 aa
AA seq
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MWFRRDLRVDDNAALYRALRACRQVVCVFVFDQALLDALPRADRRVEFIRESLVELEAEL
RGLGSGLIVRHAVAAEEIPALAHTLDVQAVFANRDDEPDALARDARVLGALANTGISFHT
FKDSTVFDRDEVMTKAGLPYTVFTPYKRAWLAKVDSFFLKPYPVRSHADALAPPPPALGG
PVPTLGEIGFESTNLQTLEIPTGTRGAGALFEDFFERIDRYDEARNFPAVRGPSYMGVHL
RFGTVSIRQLASVAHQLALQGNTGAATWLSELVWRDFYFQILAHFPHVHANGESKSFRPE
YDKIQWHHGKHADQLFDAWCEGRTGYPLVDAAMLQIRQSGYMHNRLRMVVASFLCKDLGL
DWRRGERYFALHLNDFELASNNGGWQWASSTGCDAQPYFRIFNPVTQSERFDPEGKFIRR
YLPQLAGLSNVAIHAPWMASPVELEAAGVRLGENYPKPVVDHAEAREKTMQRYAAARAKA
LQKP
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgtggtttcgccgggacctccgggtggacgacaacgcagcgctgtaccgggcgctgcgg
gcctgccggcaggtggtgtgcgttttcgtgttcgaccaggcccttctggacgccctgccc
cgcgcggaccggcgggtcgaattcatccgcgaatcgctggtggagctcgaagccgagctg
cgcggcctgggcagcgggctgatcgtgcggcacgcggtggccgccgaggagatcccggcg
ctggcccacacgctcgacgtgcaggcggtgttcgccaaccgcgacgacgaacccgacgcc
ctggcgcgcgacgcccgcgtgctcggcgcactggccaacacgggcatcagcttccacacc
ttcaaggacagcacggtcttcgaccgcgacgaggtcatgaccaaggccggcctgccctac
acggtgttcacgccgtacaagcgggcctggctggcgaaggtggattcgttcttcctgaag
ccgtacccggtgcgcagccacgccgacgcgctcgccccgccgcccccggccctgggcggg
ccggtgcccacgctgggcgagatcggcttcgaaagcaccaacctccagacgctggagatt
cccaccggcacgcgcggcgcgggcgcgctgttcgaagactttttcgagcgcatcgaccgc
tacgacgaggcgcgcaacttcccggccgtgcgcggccccagctacatgggcgtgcacctg
cgcttcggcacggtgtcgatccgccagctggccagcgtggcgcaccagctggcgctgcag
ggcaacaccggcgccgcgacctggctcagcgagctggtctggcgcgacttctacttccag
atcctggcgcactttccgcacgtgcacgcgaacggtgagtcgaagagcttccgccccgaa
tacgacaagatccagtggcaccacggcaagcacgccgaccagctgttcgacgcctggtgc
gaaggccgcaccggctacccgctggtcgatgcggcgatgctgcagatccgccagagcggc
tacatgcacaaccggctgcgcatggtggtggcgagcttcctgtgcaaggacctggggctg
gactggcggcgcggcgagcgttacttcgcgctgcacctgaacgacttcgaactggcctcg
aacaacggcggctggcagtgggccagttcgaccggctgtgacgcccagccctacttccgc
atcttcaacccggtgacgcagagcgaacgcttcgaccccgaaggcaagttcatccgccgc
tacctgccgcagctcgcggggctgtcgaacgtggcgatccatgcgccatggatggcctcg
ccggtcgagctggaggcggcaggcgtcaggctgggcgagaactacccgaagccagtggtg
gaccacgcggaggcgcgggagaagacgatgcagcgctatgcggcggcgcgggccaaggcc
ctgcaaaagccgtaa
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