Variovorax boronicumulans: CKY39_28560
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Entry
CKY39_28560 CDS
T05068
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
Organism
vbo
Variovorax boronicumulans
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Motif
Pfam:
Sigma54_activat
XylR_N
AAA_lid_14
Sigma54_activ_2
HTH_8
V4R
AAA_5
Mg_chelatase
AAA_2
HTH_1
HTH_28
HTH_30
Motif
Other DBs
NCBI-ProteinID:
ATA56733
UniProt:
A0A250DS05
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Position
complement(6189080..6190753)
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AA seq
557 aa
AA seq
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MVGELLSLLRFSAGSGHIWLDEQRMLLMHARAFAELRRELLDSLGIERARGLLVRMGFAS
GLRDGEVAVRERLAGMRAEDAFMLGPRLHSIEGIVSVQKVQVDLDVATKHFYGEFLWENS
WECEAHVADFGYGEDPQCWSQIGYASGYTTAFMGRLVVFKEVECTSMGDSRCRIVGQAAE
AWNDEHYLEYFRQHHVAEKLIDFNLGLQHLRRLQPRREYDQKLVGVSPGFRAAFELMRSA
VDSAITVLLLGETGVGKEVFARWLHDNGPRGKQPFIAVNCAAIPADLIEAELFGVEKGAY
TGAHHARAGRFERAHGGTLFLDEVGDLPLAAQVKLLRVLQTGEVERLGAEQPTKVDVRIV
AATNVNLQQAMQAGKFRTDLFYRLNTFPIQIPPLRERTADIPALVARFVEKYSALYGKKL
RGLTDKAALDVHKHAWPGNIRELENVIERAVLLAPDHGDIEACHLWMQPPGAPPDNQLDA
SGKVATGASASGADASELDALCQRVLEQNIDIASLEQRLMQTAMQRAKGNLSQAARLLGI
TRPQLAYRLKKEGLPTS
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggtgggagaacttctttctctcctgcgcttcagcgccggctcgggccacatctggctg
gacgagcagcgcatgctgctcatgcatgcccgggccttcgccgaactgcgccgcgaactg
ctcgactcgctgggcatcgagcgtgcgcgcggcctgctggtgcgcatgggttttgcttcc
ggcctgcgcgacggcgaggtggccgtgcgcgagcgccttgccggcatgcgcgccgaagac
gccttcatgctcgggccgcgcctgcattccatcgagggcatcgtctcggtgcagaaggtg
caggtcgacctcgacgtggccaccaagcatttctacggcgagttcctctgggagaactcc
tgggaatgcgaagcccacgtggccgacttcggctacggggaagacccgcagtgctggtcg
cagatcggctatgcctcgggctacaccaccgccttcatggggcggctggtggtgttcaag
gaagtcgagtgcaccagcatgggcgacagccgctgccgcatcgtcggccaggccgccgag
gcgtggaacgacgagcactacctcgagtacttccgccagcaccacgtggccgagaagctc
atcgacttcaacctcggcctgcagcacctgcgccgcctgcagccgcgccgcgagtacgac
cagaagctggtcggcgtgtcgccgggttttcgcgccgccttcgagctcatgcgcagcgcg
gtcgacagcgccatcaccgtgctgctgctcggcgagaccggcgtgggcaaggaagtgttc
gctcgctggctgcacgacaacgggccgcgcggcaagcagcccttcattgccgtcaactgc
gcggcgatcccggccgacctgatcgaggccgagctgttcggcgtggaaaagggcgcctac
accggcgcccaccatgcgcgcgccgggcgcttcgagcgcgcccacggcggcaccctgttc
ctggacgaggtgggcgacctgccgctggccgcgcaggtcaagctgctgcgcgtgctgcag
accggcgaggtcgagcgcctgggcgccgagcagccgaccaaggtcgacgtgcgcatcgtg
gccgccaccaacgtcaacctgcagcaggccatgcaggccggcaagttccgcaccgacctg
ttctaccggctcaacacctttccgatccagattccgccgctgcgcgagcgcactgccgac
atcccggcgctggtggcgcgcttcgtcgagaagtacagcgcgctgtacggcaagaagctg
cgcggcctcaccgacaaggccgcgctcgacgtgcacaagcacgcctggcccggcaacatc
cgggagctcgagaacgtgatcgagcgcgccgtgctgctggcgcccgaccacggcgacatc
gaggcctgccacctgtggatgcagccgccgggcgcgccgcccgacaaccagctcgacgcc
agcggcaaggtcgccacgggcgcgtcggcttcgggcgccgacgcgagcgagctcgacgcg
ctgtgccagcgcgtgctcgagcagaacatcgacatcgcctcgctcgagcagcgcctcatg
cagaccgcgatgcagcgcgccaagggcaacctgtcgcaggctgcgcgcctgttgggcatc
acgcgcccgcagctggcttaccggctcaagaaggaaggcctgccgacgtcctga
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