Variovorax boronicumulans: CKY39_28785
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Entry
CKY39_28785 CDS
T05068
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
vbo
Variovorax boronicumulans
Pathway
vbo00071
Fatty acid degradation
vbo00280
Valine, leucine and isoleucine degradation
vbo00310
Lysine degradation
vbo00362
Benzoate degradation
vbo00380
Tryptophan metabolism
vbo00410
beta-Alanine metabolism
vbo00640
Propanoate metabolism
vbo00650
Butanoate metabolism
vbo00907
Pinene, camphor and geraniol degradation
vbo00930
Caprolactam degradation
vbo01100
Metabolic pathways
vbo01110
Biosynthesis of secondary metabolites
vbo01120
Microbial metabolism in diverse environments
vbo01200
Carbon metabolism
vbo01212
Fatty acid metabolism
Module
vbo_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
vbo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
CKY39_28785
00650 Butanoate metabolism
CKY39_28785
09103 Lipid metabolism
00071 Fatty acid degradation
CKY39_28785
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
CKY39_28785
00310 Lysine degradation
CKY39_28785
00380 Tryptophan metabolism
CKY39_28785
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
CKY39_28785
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
CKY39_28785
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
CKY39_28785
00930 Caprolactam degradation
CKY39_28785
Enzymes [BR:
vbo01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
CKY39_28785
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
CKY39_28785
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
CKY39_28785
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
CKY39_28785
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
ATA56769
UniProt:
A0A250DRZ0
LinkDB
All DBs
Position
complement(6235519..6237669)
Genome browser
AA seq
716 aa
AA seq
DB search
MFQGESIEVLPLQDGLVELRFDRRGEAINKLDARTVDEFRQATERIAASPDVRGVLVTSA
KDVFIVGADITEFGATFQQAEADIARGVRASNELFNAFEDLAVPSVVAINGFALGGGLEL
AMLAPLRVMADTAQVGVPEVKLGLFPGFGGTVRLSRLAGLATAIDWVASGRPAKAPAALA
AGVTDEVAAPEALRDRALALLQRAVRGEIDWQAAQQRKRAPLALSAQEAGALVETARTQV
AARSGKHQPAALIALEMMAEAAGRDRAGALDLESAAFGRVAKTQAAASLVQAFLNDQALK
KLYKRHAREGRPVKQAAVLGAGIMGGGIAYTSALRGTPVRMKDIAQPQLDLGMAEAGKQL
AKQVKNGRLAQAKADAIQASIVPQLDEAGFDSVDCVVEAVVENLEVKRKVLAALEGSVKP
GTVIASNTSSLRIDDIAQPLARPEDFVGMHFFNPVPVMQLVEVIQGAKTSNAAVSTAVGY
AVAMGKTPIVVKDCPGFLVNRILTPYINAFVQLVADGADFEAVDRAMEAFGWPMGPAYLQ
DVVGMDVGAHVGDVIAAGYPQRMPALERNAVKLMVANKRYGQKNGAGFYRYENDPTGRPR
KSAAPEAHALVATLQPQGRRDFADTEIVERMMLPMVVEAAHALEDGVVATPAELDMALLL
GVGFPAYAGGALKYADWLGLDRVVALCDKHAALGAPYAPTARMREMAARKLRYYPV
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
ttgttccaaggcgaaagtatcgaagtcctgccgttgcaggacgggctggtggagctgcgc
ttcgaccggcgcggcgaggccatcaacaagctcgacgcacgcacggtcgacgagttccgc
caggccaccgaacgcatcgcggcatcgcccgatgtgcgcggcgtgctggtgacgagcgcg
aaagacgtgttcatcgtcggcgctgacatcaccgagttcggcgccaccttccagcaggcc
gaggccgacatcgcgcgcggcgtgcgcgccagcaacgagctgttcaacgccttcgaagac
ctggccgtgcccagcgtggtcgccatcaacggcttcgcactcggcggcgggctggagctg
gcgatgctcgcgccgctgcgcgtgatggccgacacggcccaggtcggcgtgcccgaggtg
aagctcgggctgttccccggcttcggcggcacggtgcggctgtcgcgcctggcgggcctg
gccacggccatcgactgggtggcgagcggcaggccggccaaggcgccggctgcgctggcc
gcgggcgtgaccgacgaggtcgccgcgcccgaggccctgcgagaccgtgcgctcgcgctg
ctgcagcgtgcggtgcgcggcgagatcgactggcaggccgcgcagcaacgcaagcgcgcg
ccgctggcgctgtcggcccaggaggcgggcgcgctggtcgagaccgcgcgcacgcaggtg
gcggcgcgcagcggcaagcaccagcccgcagccctcattgcgctcgaaatgatggccgag
gccgccggccgcgaccgcgcgggcgcactcgacctcgaatcggccgccttcggccgcgtc
gcgaagacgcaggccgccgcctcgctggtgcaggcctttctcaacgaccaggcgctcaag
aagctctacaagcgccacgcgcgcgaaggccgtccggtgaagcaggcggccgtgctcggt
gccggcatcatgggcggtggcatcgcctacaccagcgcactgcgcggcacgccggtgcgc
atgaaggacatcgcgcagccgcagctcgatctgggcatggccgaggccggcaagcagctc
gccaagcaggtgaagaacggccggctcgcgcaggccaaggccgatgccattcaagcctcg
atcgtgccgcagctcgacgaggccggcttcgacagcgtggactgcgtggtcgaggcagtg
gtcgagaacctcgaggtcaagcgcaaggtgctcgcggcgctcgaaggcagcgtgaagccc
ggcacggtgatcgcctcgaacacctcgagcctgcgcatcgacgacatcgcccagccgctt
gcgcgacctgaagacttcgtcggcatgcacttcttcaaccccgtgccggtgatgcagctg
gtggaagtgatccagggcgcgaagaccagcaatgccgccgtgtccaccgccgtgggctat
gccgtggccatgggcaagacgcccatcgtggtgaaggactgcccgggcttcctggtcaac
cgcatcctcacgccgtacatcaatgccttcgtgcaactggtggccgatggcgccgacttc
gaggcggtcgaccgcgcgatggaagccttcggctggcccatgggtccggcctacctgcag
gacgtggtgggcatggacgtgggcgcgcacgtgggcgacgtgatcgccgcgggctacccg
cagcgcatgccggccctcgaacgcaacgccgtgaagctcatggtggcgaacaagcgctac
ggccagaagaacggcgcgggcttctaccgctacgagaacgaccccacgggccgcccgcgc
aagtcggccgcgcccgaggcgcatgcgctggtcgccacgctgcagccgcaagggcggcgc
gacttcgcggacacggagatcgtcgaacgcatgatgctgccgatggtggtcgaggccgcg
cacgcgctcgaagacggcgtggtcgccacgccggccgagctcgacatggcgctgctgctc
ggcgtgggctttccggcctacgcgggcggcgcgctcaagtacgccgactggctggggctg
gaccgcgtggtcgcgctgtgcgacaaacatgcggcgctcggcgcgccgtatgcgcccacg
gcgcggatgcgcgagatggcggcgcgcaagttgcgctactacccggtctga
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