Variovorax boronicumulans: CKY39_28935
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Entry
CKY39_28935 CDS
T05068
Name
(GenBank) Crp/Fnr family transcriptional regulator
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
vbo
Variovorax boronicumulans
Pathway
vbo02020
Two-component system
vbo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vbo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CKY39_28935
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CKY39_28935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vbo03000
]
CKY39_28935
Transcription factors [BR:
vbo03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
CKY39_28935
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_Crp_2
cNMP_binding
HTH_24
MarR_2
Crp
GntR
HTH_3
HTH_11
HTH_AsnC-type
HTH_29
HTH_23
Xre-like-HTH
Phage_rep_O
TrmB
DUF7582
RP-C
Motif
Other DBs
NCBI-ProteinID:
ATA56797
UniProt:
A0A1E7TYY6
LinkDB
All DBs
Position
complement(6274272..6274964)
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AA seq
230 aa
AA seq
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MLDRALRWNELFSQWPDARRAELMKSARLVRYRRRTQVLARDRHKRELLAVVSGCLEISS
MSPQGRKYVNALLGPGQVAPLVRLLEDVPLPYDYHAHEDSVIVHLPSDAVIAVLDAEPAL
WRGVARLGLKRQRLSVVLLQNQMLNSVRGRVAATLMSVIHFYGMQVEAAASLPVRLSQND
LAAMLGLSRQTINKELGRLVAEGVIDMSYKRIRIVDPDQLAVIATGTGPQ
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
ctgctcgaccgcgcgctgcgctggaacgagctgttctcccaatggcccgacgcgcgccgc
gccgagctcatgaagtcggcgcggctggtgcgctaccgccgccgcacgcaggtgctggcg
cgcgaccgccacaagcgcgagctgctggcggtggtgtcaggctgcctggagatcagcagc
atgagcccgcaggggcgcaagtacgtcaacgcgctgctcggacccggccaggtggcgccg
ctggtgcgcctgctcgaggacgtgccgctgccctatgactaccacgcgcacgaagactcg
gtgatcgtccacctgcccagcgacgccgtgatcgcggtgctcgacgccgagcccgcgctg
tggcgcggcgtggcccggctgggcctgaagcgccagcggctgagcgtggtgctgctgcaa
aaccagatgctgaactcggtgcgcgggcgcgtggccgccacgctgatgagcgtgatccac
ttctacggcatgcaggtggaggccgccgcgagcctgccggtgcggctgtcgcagaacgac
ctcgcggcgatgctcgggctgtcgcgccagaccatcaacaaggagctggggcggctggtc
gcggaaggcgtgatcgacatgagctacaagcgcatccgcatcgtggaccccgaccagctc
gcggtcatcgcgacgggcaccgggccgcagtga
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