Variovorax boronicumulans: CKY39_29260
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Entry
CKY39_29260 CDS
T05068
Name
(GenBank) hydroxymethylglutaryl-CoA lyase
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
vbo
Variovorax boronicumulans
Pathway
vbo00280
Valine, leucine and isoleucine degradation
vbo00650
Butanoate metabolism
vbo00907
Pinene, camphor and geraniol degradation
vbo01100
Metabolic pathways
vbo01120
Microbial metabolism in diverse environments
vbo04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
vbo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
CKY39_29260
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
CKY39_29260
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
CKY39_29260
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
CKY39_29260
Enzymes [BR:
vbo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
CKY39_29260
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GFIT
Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-ProteinID:
ATA56856
UniProt:
A0A250DR54
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Position
complement(6346829..6347749)
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AA seq
306 aa
AA seq
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MKLPAQVKLVDVGPRDGLQNEKQPVSAEVKIGLVHRLQDAGLKEIEVTSFVSPKWVPQMA
DNAEVMHGITRKPGVLYSVLTPNMKGFEAAIAAPREEWPDEIVVFGAASEAFSQKNINCS
IAESIERFAPVVEAARAKGIAVRGAMSCTVGCPYEGEIAPAKVGYLAQLMKGIGVQRVDV
ADTIGVGTPRKVQAAMEATLAHFDVDAISGHFHDTYGQALVNTLAALELGVWNFQSSSAG
LGGCPYAKGATGNVATEDVVYMLHGMGIATGIDLDKLIDAGVYISEALGREPNSRASKAI
RTKRAG
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgaaactccccgcccaggtcaagctcgtcgacgtcggtccgcgcgacggcctccagaac
gaaaagcaacccgtctccgccgaagtcaagatcggcctcgtgcaccgcctgcaggacgcc
ggcctgaaagagattgaggtcaccagcttcgtctcgcccaagtgggtgccgcagatggcc
gacaacgccgaagtgatgcacggcatcacgcgcaagccgggcgttctctactcggtgctc
acgcccaacatgaagggcttcgaggccgccattgccgcgccgcgcgaagagtggcccgac
gagatcgtggtgttcggcgccgcgagcgaggccttcagccagaagaacatcaactgctcg
atcgccgagagcatcgagcgcttcgcgcccgtggtcgaggcggcgcgcgccaagggcatc
gccgtgcgcggcgcgatgtcgtgcaccgtgggctgcccctacgaaggcgagatcgcgccg
gccaaggtcggctacctcgcgcaactgatgaagggcatcggcgtgcagcgcgtggacgtg
gccgacaccatcggcgtgggcacgccgcgcaaggtgcaagccgcgatggaggccacgctg
gcgcacttcgatgtcgacgccatctccggccacttccacgacacctacgggcaggcgctg
gtcaacacgctggcggcgctcgagctgggcgtgtggaacttccagtcgtcctcggccggc
ctgggcggctgtccctacgccaagggcgcgacgggcaacgtcgcgaccgaagacgtggtc
tacatgctgcacggcatgggcatcgccaccggcatcgacctggacaagctcatcgacgcg
ggcgtgtacatcagcgaagcgctgggccgcgaaccgaactcgcgcgcctcgaaggcgatc
cgcaccaagcgggccggctga
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