Variovorax boronicumulans: CKY39_29570
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Entry
CKY39_29570 CDS
T05068
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
vbo
Variovorax boronicumulans
Brite
KEGG Orthology (KO) [BR:
vbo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vbo02000
]
CKY39_29570
Transporters [BR:
vbo02000
]
Other transporters
Pores ion channels [TC:
1
]
CKY39_29570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
ATA56906
UniProt:
A0A250DRA5
LinkDB
All DBs
Position
complement(6415914..6418253)
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AA seq
779 aa
AA seq
DB search
MKQHSRALAIAMAFPLSAPVWAQQQTPPDVDPPEAGAAAAPGRTLGTVTISGGRPTSLPT
QIPTTIEGVTAEQIAETVNATDAEDALKYLPSLLVRKRYIGDFNHAVLATRASGTGNSAR
AMVYADGIMLSNPLGNGATFAPRWGMVSPDEIERVDVLYGPFSAAYPGNSVGAVVDYVTR
MPTQLEAHVKLSGFTSNFDLYNSHSSPGGQQLDLSLGSRSGDWSWWLGASRTHSKGQSLS
FANRLASAGTVGSAGTPVTGAVLGLNPSNQPWWLLGGITAYDTTQEQAKLKLAYDFSPTV
RATYTLGAWHNTTHGSTDTYLRDALGQPVYGGRVNLGGRTYTLDAPAAAFAPTETALTHY
MHGLSVKSHTGGVFDWEVAASLFDYAKDTSRTPTTALPGAFYGGPGRTTDMGGTGWHTFK
AAGTWRPTGSAEGVGAHVVDFGVQQDTARLRSAIGNTRDWIGGPAVSPFSAFNGNTRLRS
LYVQDTWRFAKDWKTTLGLRHERWEAYGGQLGNAARLLDFAPRKNSFVSPKAALAWQVTP
DWHFKASVGRAVRMPTVSELYQGSIEGNRIVNTNPELRPERSWTAELSAERDLKRWGVDG
VLRTTLFFEHTKDALYTQALTNLVSTVQNVDAIRTRGLEVAINTVDAGIQGLDLGGSLTL
TDSKITANRGFPASVGRDQPRVPKVRASLLATYRPDAKWSYTVGARYSGRQYGTLDNSDP
NGMAFMGFSKFFVVDARIRYRIDRQWSAAVGIDNLNNRTYWAFHPYPQRTFVAELKFDL
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagcactcccgcgccctggcgatcgccatggcatttcccctcagcgcgccggtg
tgggcgcagcagcaaacgccgccggacgttgatccgccggaggccggcgccgcggccgcc
ccgggccgcacgctcggcaccgtcaccatcagcggcggccggccgacctcgctgccgacg
cagatccccaccaccatcgaaggcgtgaccgccgagcagatcgccgagacggtcaacgcc
accgacgccgaagacgcgctcaagtacctgccgagcctgctggtgcgcaagcgctacatc
ggcgacttcaaccacgcggtgctcgccacgcgcgcctcgggcacgggcaacagcgcccgc
gcgatggtctacgccgacggcatcatgctgtcgaacccgctgggcaacggcgccaccttc
gcgccgcgctggggcatggtgtcgcccgacgagatcgagcgcgtcgacgtgctctacggt
ccgttctcggccgcctacccgggcaactcggtgggcgccgtggtcgactacgtgacgcgc
atgcccacgcagctcgaggcgcacgtcaagctcagcggcttcacctcgaacttcgacctg
tacaacagccattcgtcgccgggcggccagcagctcgacctgtcgctgggcagccgcagc
ggcgactggtcgtggtggctcggcgcctcgcgcacccacagcaaggggcagtcgctgtcg
ttcgccaaccggctcgcgagcgccggcacggtgggcagcgcgggcacacccgtcaccggc
gcggtgctcgggctgaacccgtcgaaccagccgtggtggctgctgggcggcatcaccgcc
tacgacacgacccaggagcaggccaagctcaagctggcctacgacttctcgcccacggtg
cgcgccacctacacgctgggcgcctggcacaacaccacgcacggcagcaccgacacctac
ctgcgcgatgcgctcggccagccggtgtacggcgggcgcgtgaacctcggcggacgcact
tacaccctcgacgcaccggcggcggccttcgcgccgaccgagacggcgctcacgcactac
atgcacggcctctcggtgaagagccacacgggcggcgtgttcgactgggaggtggcggcg
agcctgttcgactacgcgaaggacacctcgcgcacgccgaccacggcgctgccgggcgcc
ttctacggcggccccggccgcaccaccgacatgggcggcaccggctggcacaccttcaag
gccgcgggcacctggcggcccacaggctcggccgaaggcgtgggcgcgcacgtggtcgac
tttggcgtccagcaggacaccgcacggctgcgcagcgccatcggcaacacgcgcgactgg
atcggcgggccggccgtgtcgccgttctccgccttcaacggcaacacgcgactgcgctcg
ctctacgtgcaggacacctggcgcttcgcgaaagactggaagaccacgctgggcctgcgc
cacgagcgctgggaggcctacggcggccagctcggcaacgcggcgcggctgctcgacttc
gcgccgcgcaagaacagcttcgtctcgcccaaggccgcgctcgcctggcaggtcacgccc
gactggcacttcaaggcctcggtcggccgcgccgtgcgcatgcccaccgtgagcgagctc
taccagggctcgatcgagggcaaccgcatcgtcaacaccaaccccgagctgcgccccgag
cgctcgtggaccgccgagctgagcgccgagcgcgacctcaagcgctggggcgtcgacggc
gtgctgcgcaccacgctgttcttcgagcacacgaaggacgcgctctacacccaggcgctc
accaacctcgtgagcaccgtgcagaacgtcgacgccatccgcacgcgcgggctggaggtg
gcgatcaacacggtcgacgcgggcatccaggggctggacctgggcggtagcctcacgctg
accgattcgaagatcaccgccaaccgcggcttcccggccagcgtggggcgcgaccagccg
cgcgtgcccaaggtgcgcgcctcgctgctcgccacctaccggcccgatgcgaagtggagc
tataccgtcggcgcgcgctacagcgggcgccagtacggcacgctcgacaacagcgatccg
aacggcatggccttcatgggcttctcgaagttcttcgtggtcgatgcgcgcatccgctac
cgcatcgaccgccagtggagcgccgctgtcggcatcgacaacctgaacaaccgcacctac
tgggccttccacccgtacccgcaacgcaccttcgtggccgaactgaagttcgacctctga
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