Variovorax boronicumulans: CKY39_30350
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Entry
CKY39_30350 CDS
T05068
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
vbo
Variovorax boronicumulans
Pathway
vbo00550
Peptidoglycan biosynthesis
vbo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vbo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CKY39_30350
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vbo01002
]
CKY39_30350
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vbo01011
]
CKY39_30350
Enzymes [BR:
vbo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
CKY39_30350
Peptidases and inhibitors [BR:
vbo01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
CKY39_30350
Peptidoglycan biosynthesis and degradation proteins [BR:
vbo01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
CKY39_30350
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
ATA57046
UniProt:
A0A1E7TVG0
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All DBs
Position
complement(6569520..6570689)
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AA seq
389 aa
AA seq
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MNRFFTALRALVLTAAASVGVIAAAQMPAPPEIAARSYLLLDVTANQILAQKDIDSPVEP
ASLTKLMTAYVAFDALRAKKITLTQTLPVSPRAWKMPGSRMFIDPKMQVPVEDLIKGVIV
QSGNDATVALAEGVGGTVEHFVEMMNAQAKVLGMKNTTYKNPEGLTAPGHTTTARDLSIL
ATRLVRDFPEEAKYYAIKKYRYPGTPSTNDTNRNLLLFRDPTVDGLKTGHTDAAGYCMIA
TAKRDFPNLTGGRRLLSIVLGASSEAVRANESQKLLNWGYTAYDAVRLFDAGQPAATPAV
WKGKANVLKLGRPEAIVVAVPTGSASKIKTQVSRPDPLVAPFTKYQAVGSLKVTLDDQPL
ADVPLVALEPVEQAGVFGRAWDAVRLWIK
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgttttttcactgcgcttcgcgcactggtgctgaccgctgctgcctcggttggc
gtgatcgccgccgcccagatgccggccccgcctgaaatcgccgcgcgcagctacctgctg
ctggacgtgaccgcgaaccagatcctggcgcagaaggacatcgacagccccgtcgagccg
gcctcgctcaccaagctgatgaccgcgtacgtcgcgttcgatgcgctgcgcgccaagaag
atcacgctgacccagaccctgccggtgagcccgcgcgcctggaagatgcccggttcgcgc
atgttcatcgaccccaagatgcaggtgccggtggaagacctgatcaagggcgtgatcgtg
cagtcgggcaacgacgccacggtggcgctggccgaaggcgtgggcggcacggtggagcac
ttcgtcgagatgatgaacgcccaggccaaggtgctgggcatgaagaacaccacctacaag
aaccccgaaggcctcacggcgcccggccacacgaccacggcgcgcgatctgagtatcctg
gccacgcgcctggtgcgggacttccccgaggaagccaagtactacgccatcaagaagtac
cgctacccgggcaccccgtcgaccaacgacaccaaccgcaacctgctgctgttccgcgac
ccgaccgtcgacggcctgaagaccggccacaccgacgccgccggctactgcatgatcgcc
accgccaagcgcgacttcccgaacctgaccggcggccgccgcctgctgtcgatcgtgctg
ggcgccagcagcgaagccgtgcgcgccaacgagtcgcagaagctgctgaactggggatac
acggcctacgacgccgtgcgcctgttcgacgccggccagccggctgccacgcccgccgtc
tggaagggcaaggccaacgtgctgaagctgggccgccccgaggccatcgtggtcgccgtg
ccgaccggttccgccagcaagatcaagacgcaggtgtcgcgccccgatccgctggtcgcg
ccgttcaccaagtaccaggccgtcggctcgctcaaggtcacgctggacgaccagcccctg
gcggacgtgccgctggtcgccctggagccggtcgagcaggccggcgtcttcggccgcgcc
tgggacgccgtgcgtctctggatcaagtaa
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