Variovorax boronicumulans: CKY39_30650
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Entry
CKY39_30650 CDS
T05068
Name
(GenBank) nodulation factor ABC transporter ATP-binding protein NodI
KO
K09695
lipooligosaccharide transport system ATP-binding protein
Organism
vbo
Variovorax boronicumulans
Pathway
vbo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vbo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CKY39_30650
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vbo02000
]
CKY39_30650
Transporters [BR:
vbo02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Lipooligosaccharide transporter
CKY39_30650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_15
AAA_22
SMC_N
AAA_16
AAA_30
AAA_19
AAA_23
Motif
Other DBs
NCBI-ProteinID:
ATA57097
UniProt:
A0A250DRW0
LinkDB
All DBs
Position
6629145..6630059
Genome browser
AA seq
304 aa
AA seq
DB search
MFQVRGLRKRYGETTVVDDLSFEIAPGECLGVIGPNGAGKTTTIRMCLGLTAPDGGSIEA
LGLQMPRDALAIKAQLGVVSQFDTLDPDFSCAENLVVYGRYFGFSKAHVRARVPQLLEFA
ALSHKADAKPGELSGGMRRRLSLARALVNDPKLLLLDEPTTGLDPQARHLMWERLQVLLQ
QGKSILLTTHFMDEAERLCSRLLVLDHGRKIAEGRPRDLIAEHLEPDVVEVYGNGALSLA
GSAELQALAARVEVSGETVFFYTQDARRLLDALTQHGGLRTFHRPANLEDLFLKLTGRQI
RQDG
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
ttgttccaggtccgtgggctgcgcaagcgctacggcgagaccacggtcgtcgacgacctc
tcgttcgagatcgcacccggcgagtgcctgggcgtgatcgggccgaacggtgcgggcaag
accaccaccatccgcatgtgcctgggcctcaccgcgcccgacggcggcagcatcgaggcg
ctgggcctgcagatgccgcgcgacgcgctggcgatcaaagcgcagctgggcgtggtgtcg
cagttcgacaccctcgaccccgacttcagctgcgccgagaacctcgtggtgtacggccgc
tacttcggcttcagcaaggcgcatgtgcgtgcgcgcgtgccgcagctgctggagttcgcc
gcgctctcgcacaaggccgacgccaagcccggcgagctgtcgggcggcatgcgccggcgc
ctgtcgctggcgcgcgcgctggtgaacgaccccaagttgctgctgctcgacgagcccact
accgggcttgacccgcaggcgcggcacctgatgtgggagcggttgcaggtgctgctgcag
cagggcaagtcgatcctgttgaccacgcacttcatggacgaggccgagcgcctgtgttcg
cgcctgctggtgctcgaccacggccgcaagatcgcggagggccggccgcgcgatctgatt
gcagagcatctggagcctgatgtggtcgaggtgtatggcaatggggcgctgtcgctggcc
gggtcggccgagctgcaggcgctggctgcgcgcgtggaggtgagtggtgagaccgtgttc
ttctatacgcaggatgcgcggcgtctgctcgacgcgctgacgcagcatggcgggctgcgc
acctttcatcggcctgccaatctggaagatcttttcctcaagctcaccggtcggcagatt
cgccaggatggctag
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integrated database retrieval system
