Variovorax boronicumulans: CKY39_30800
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Entry
CKY39_30800 CDS
T05068
Name
(GenBank) rRNA pseudouridine synthase
KO
K06182
23S rRNA pseudouridine2604 synthase [EC:
5.4.99.21
]
Organism
vbo
Variovorax boronicumulans
Brite
KEGG Orthology (KO) [BR:
vbo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vbo03009
]
CKY39_30800
Enzymes [BR:
vbo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.21 23S rRNA pseudouridine2604 synthase
CKY39_30800
Ribosome biogenesis [BR:
vbo03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CKY39_30800
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
ATA57123
UniProt:
A0A1E7TTS5
LinkDB
All DBs
Position
complement(6660541..6661374)
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AA seq
277 aa
AA seq
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MTEPSTSPHAPVRLNKRMAELGLCSRREADDWIAQGWVRVNGKPAEMGVKVTPNDRIEVD
KAAKGQQANQVTILINKPIGYVSGQAEDGHEPAVTLFTPQNRWSEDNARFFFGPQQLRGL
APCGRLDIDSTGLLVMTQDGRIARQLIGEDSTMDKEYLVRVAYHGLDQPAPTGQLVRLDD
DDPVTTNVQAVFPPAMLARLRHGLSLDGQALKPARVEWQNPEQLRFVLTEGKKRQIRRMC
ELVGLKVVGLKRVRIGKVMLGNLPVGQWRYLAPHEKF
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagccctccacctccccccacgcgcccgtgcgcctcaacaaacgcatggccgaa
ctcggcctgtgctcgcgccgcgaggcggacgactggatcgcgcagggctgggtgcgggtc
aacggcaagcccgccgagatgggcgtgaaggtcacgcccaacgaccgcatcgaggtcgac
aaggccgccaaggggcagcaggcgaaccaggtcacgatcctcatcaacaagccgatcggc
tacgtgagcgggcaggccgaagacggccacgagccggcggtcacgctgttcacgccgcag
aaccgctggtcggaagacaacgcgcgcttcttcttcggcccgcagcagctgcgcggcctg
gcgccgtgcgggcggctggacatcgactccaccggcctgctcgtgatgacgcaggacggc
cgcatcgcgcgccagctcatcggcgaagactcgacgatggacaaggaatacctcgtgcgc
gtggcctaccacggcctcgatcagcccgcgcccaccggccagctggtgcgcctggacgac
gacgacccggtcaccaccaacgtgcaggcggtgtttccgcccgccatgctggcccggttg
cgacacggcctgagcctggacggccaggcgctcaagccggcgcgcgtggagtggcagaac
cccgagcagctgcgcttcgtgctcaccgaaggcaagaagcgccagatccgccgcatgtgc
gaactggtcggcctgaaggtggtgggcctgaagcgcgtgcgcatcggcaaggtgatgctc
ggcaacctgccggtgggccagtggcgctacctggcgccgcacgaaaaattctga
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