Variovorax boronicumulans: CKY39_30980
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Entry
CKY39_30980 CDS
T05068
Name
(GenBank) multidrug efflux protein
KO
K18307
multidrug efflux pump
Organism
vbo
Variovorax boronicumulans
Pathway
vbo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vbo00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CKY39_30980
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vbo02000
]
CKY39_30980
Transporters [BR:
vbo02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
CKY39_30980
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
ATA57155
UniProt:
A0A250DS19
LinkDB
All DBs
Position
6696045..6699143
Genome browser
AA seq
1032 aa
AA seq
DB search
MKFTDLFVRRPVLALVVSTLILLLGARALGDLPVRQYPLTESTTLTITTQYPGASPELMQ
GFVTQPIAQAVATIENVDYLSSSSTLGRSVISVRMKLNADANQALTQAMAQVSQVKYRLP
AEAFDPVILKSSGEATAVAYVGFSSKTMPVPQLTDYLSRVVQPQFASIEGVSGVEVSGGQ
TLAMRVWLDANRMAARGISAGELADALRQNNVQAAPGQVKGLYVVSNIRVNTDLVNVAEF
RDMVIKRDGDAIVRLGDVATVELGAASADSSATMDGDKAIYLGLQAAPNGNPLVIVKRIR
DLLPGIKQNLPPGVEVQLPFELARFIEASIDEVQKTLLEAIAIVVLVIFLCLGSLRAVLI
PVVTIPLSMLGAAALMLLFGFSINLLTLLAMVLAIGLVVDDAIVVVENVHRHIEEGKSRV
QAALIGAREVAGPVIAMTLTLAAVYAPIGLMGGLTGSLFKEFAFTLAGAVVVSGVIALTL
SPVMSSFLLPQDATAGRMARYAEAFFHKLATAYGRLLDVSLHHRWVTGLLAAAVLVSLPF
LYNAAQRELAPGEDQAMVMTVIKSPQHANIDYVEKFGQKWDEVLAKLPENTGRWLINGSD
GVSNSIGGVQLSDWKDRQRNADQIQGDVQGGMNEVEGSSVFAFQLPSLPGSTGGLPVQMV
IRSAGDHRSVFEAMETLKKAARESGKFAVVDSDLEFNNPVTEVRVDRAKANSMGVTMKAI
GDTLAVLVGENYVNRFGMDGRSYDVIPQSPRDQRLTAEALSRYFVKSASGQPVPLANLVQ
LSTSVGPNKLTQFNQLNAATFQAIPMPGVTMGDAVAFLSEEAKKLPAGFSYDWQSDARQF
TQEGSALVMAFVFAIVVIYLVLAAQYESLRDPLIILVSVPMSICGALVPLALGFATINIY
TQIGLVTLIGLISKHGILMVEFANEIQERLNLERRAAIEQAARIRLRPILMTTAAMVVGL
VPLLFASGAGANSRFSIGLVIVVGMLVGTLFTLFVLPTMYTLLARDHRTVGRSQRAAELE
ALVAREPAGDTV
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcaccgacctcttcgtgcgccggcccgtgctggcgctggtggtgagcacgctc
attctgctgctcggcgcgcgtgcgctgggcgacctgccggtgcgccagtacccgctcacc
gagagcaccacgctcaccatcaccacgcagtaccccggcgcctcgccggagctgatgcag
ggcttcgtcacgcagcccatcgcgcaggcggtggcgacgatcgagaacgtcgactacctc
tcgtcgtcgtccacgctgggccgcagcgtgatcagcgtgcgcatgaagctcaacgccgac
gccaaccaggcgctcacgcaggccatggcacaggtcagccaggtgaagtaccggctgccg
gccgaggccttcgacccggtgatcctcaagtcgtcgggcgaggccacggccgtcgcctac
gtgggcttctcgagcaagacgatgcccgtgccgcagctcaccgactacctctcgcgcgtg
gtgcagccgcagttcgcgtcgatcgagggcgtctcgggcgtcgaggtgtcgggcgggcag
acgctggcgatgcgcgtgtggctggacgccaaccgcatggccgcgcgcggcatctcggcc
ggcgagctggccgacgcgctgcgccagaacaacgtgcaggccgcccccgggcaggtgaag
ggcctgtacgtggtgtcgaacatccgcgtgaacaccgacctggtgaacgtggcggagttc
cgcgacatggtcatcaagcgcgacggtgacgccatcgtgcggctgggcgacgtggccacc
gtggaactgggtgcggcgagcgccgacagcagcgccacgatggacggcgacaaggccatc
tacctcggcctgcaggccgcgcccaacggcaacccgctggtgatcgtgaagcgcatccgc
gacctgctgcccggcatcaagcagaacctgccgccgggcgtggaggtgcagctgcccttc
gaactcgcgcgcttcatcgaggcctcgatcgacgaggtgcagaagacgctgcttgaagcc
atcgccatcgtggtgctggtgatcttcctgtgcctgggctcgctgcgcgcggtgctcatt
ccggtggtgaccattccgctgtcgatgctgggcgcggcggcgctgatgctgctgttcggc
ttcagcatcaacctgctcacgctgctggcgatggtgctggccatcggcctggtggtggac
gacgccatcgtggtggtggagaacgtgcaccgccacatcgaggaaggcaagtcgcgcgtg
caggccgcgctgatcggcgcgcgcgaagtggccggcccggtgatcgcgatgacgctcacg
ctggccgcggtgtacgcgcccatcggcctcatgggcgggctcacggggtcgctgttcaag
gagttcgccttcacgctggcaggcgcggtggtggtgtcgggcgtgatcgcgctcacgctg
tcgcccgtgatgagctcgttcctgctgccgcaggacgccacggcgggccgcatggcgcgc
tatgccgaggccttcttccacaagctggccacggcctacgggcggctgctcgacgtgtcg
ctgcaccatcgctgggtcacgggcctgctggcggcggccgtgctggtgagcctgcccttt
ttgtacaacgcggcgcaacgcgagctggcgccgggcgaagaccaggcgatggtgatgacc
gtcatcaagtcgccgcagcacgccaacatcgactacgtcgagaagttcggccagaagtgg
gacgaggtgctggccaagctgcccgagaacaccggccgctggctcatcaacggctcggac
ggcgtctccaacagcatcggcggcgtgcagctgtccgactggaaagatcgccagcgcaac
gccgaccagatccagggcgacgtgcagggcggcatgaacgaggtcgagggcagcagcgtg
ttcgcctttcagttgccgtcgcttcccggttcgaccggcgggcttccggtgcagatggtg
atccgcagcgcgggcgaccaccgcagcgtgttcgaggcgatggaaacgctgaagaaggcg
gcacgcgagagcggcaagttcgccgtggtcgacagcgacctggagttcaacaaccccgtg
accgaggtgcgcgtggaccgcgccaaggccaacagcatgggcgtgaccatgaaggccatc
ggcgacacgctggccgtgctggtgggcgagaactacgtcaaccgcttcggcatggacggc
cgctcgtacgacgtgattccgcagtcgccgcgcgaccagcggctcacggccgaggccctg
tcgcgctacttcgtgaagagcgccagcggccagcccgtgccgctggccaacctggtgcag
ctgtcgaccagcgtggggcccaacaagctcacgcagttcaaccagctcaacgccgcgacc
ttccaggccattccgatgccgggcgtgaccatgggcgacgccgtggcgttcctcagcgaa
gaggcgaagaagctgccggccggcttcagctacgactggcagtcggacgcacgccagttc
acacaggaaggctcggcgctggtgatggccttcgtgttcgcgatcgtggtgatctacctg
gtgctggccgcgcagtacgagagcctgcgcgacccgctgatcatcctggtcagcgtgccg
atgtcgatctgcggcgcgctggtgccgctggcgctgggcttcgccaccatcaacatctac
acgcagatcgggctggtgacgctcatcgggctcatcagcaagcacggcatcctgatggtg
gagtttgccaacgagatccaggagcgcctgaacctggaacgccgcgccgccatcgagcag
gccgcgcgcatccggctgcgcccgatcttgatgaccacggccgcgatggtggtgggcctg
gtgccgctcttgttcgccagcggcgcgggcgccaacagccgcttcagcatcggcctggtg
atcgtggtcggcatgctggtgggcacgctgttcacgctgttcgtgctgcccaccatgtac
acgctgctggcgcgcgaccaccgcacggtgggccgctcgcagcgcgccgccgaactcgag
gcgctcgtggcgcgcgagcctgccggcgacaccgtctga
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