KEGG   Variovorax boronicumulans: CKY39_31585
Entry
CKY39_31585       CDS       T05068                                 
Symbol
clpV
Name
(GenBank) type VI secretion system ATPase TssH
  KO
K11907  type VI secretion system protein VasG
Organism
vbo  Variovorax boronicumulans
Pathway
vbo03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vbo00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    CKY39_31585 (clpV)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vbo02044]
    CKY39_31585 (clpV)
Secretion system [BR:vbo02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   CKY39_31585 (clpV)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_5 ClpB_D2-small Clp_N AAA_16 AAA_22 nSTAND3 AAA_7 Sigma54_activat TniB IstB_IS21 ATPase_2 NACHT ResIII AAA_25 SRP54 SLFN-g3_helicase DUF815 Zeta_toxin T2SSE DUF5947 ARM_KDM8_N NBD_SMAX1
Other DBs
NCBI-ProteinID: ATA57263
UniProt: A0A250DTL3
LinkDB
Position
complement(6821735..6824461)
AA seq 908 aa
MSTSLKTLITKLNASARMATQRAANLCLAHGHYEVDLEHLFLALLEQTDNDLARVLRVNR
ISATAIQSDLEREIQTFKNGNTRTPVFSQHLQQLFQQAWLLASLDAHAAQIRSGHLLLAL
LTQPDLAQLAQRGSPLFAKIRLEDLKHDFDKLTDGSSEAAEAGASGAAAEGDAQQAPADP
LAAGVPGKTPALDQFTTNLTQRAKDGALDPVIGRDTEIRQVIDILMRRRQNNPILTGEAG
VGKTAVVEGLALRIAAQDVPESLRAVALHTLDMGLLQAGASVKGEFENRLKNVIAEVKKS
PHPIVLFIDEAHTMIGAGGQAGQSDAANLLKPALARGELRTIAATTWGEYKKYFEKDAAL
ARRFQVVKVEEPSETLAAAMLRGMVPLMEKHFNIRVLDEAITEAVRLSHRYISGRQLPDK
AVSVLDTACAKVALGQSATPALIEEANRGLERIEAESAALVRDTAAGGRHEARLAELAEK
KGALQAELAASQQRLAEENALVERIRALRAQRDESVAQQPEAAPAVAEKAPARAASRKKT
AATADPARAELDALLAELRALQGTTPMVPLQVDGHVVAEIVSAWTGVPLGRMVKDEIKTV
RALDTLLAERVIGQDHALAAVAQRVRTASARLEDPNKPRGVFMFVGPSGVGKTETALALA
DILYGGEKKLITINMSEYQEAHSVSGLKGSPPGYVGYGEGGVLTEAVRRQPYSVVLLDEV
EKAHPDVLEMFFQVFDKGMMDDAEGREIDFRNTLIILTSNIGSSQIMQACLNKADDERPA
PDALADALRPVLMKAFKPAFLGRMKVAPFYPITDAVLEQIIALKLGRIRDRIATNHKAVF
EWDDALVEAVLARCTEVDSGARNVDHILNGTLLPEIAEAVLTRMADETPLAKIKASCGKG
GEFRYRIT
NT seq 2727 nt   +upstreamnt  +downstreamnt
atgagcacctcgctgaagacactgatcaccaagctcaacgccagcgcccgcatggccacg
cagcgcgccgccaacctgtgcctggcccacggccactacgaggtcgacctggagcacctg
ttcctggcgctgctggagcagaccgacaacgacctcgcgcgtgtgctgcgcgtcaaccgc
atcagcgccaccgcgatccagtcggacctggagcgcgagatccagaccttcaagaacggc
aacacgcgcacgccggtgttctcgcagcacctgcagcagttgttccagcaggcatggctg
ctcgcctcgctcgacgcgcacgcggcgcagatccgctcgggccacctgctgctcgcgctg
ctgacgcagcccgacctcgcgcagctcgcgcagcgcggctcgccgctctttgccaagatc
cgcctcgaagacctgaagcacgacttcgacaagctcaccgacggttcgagcgaagcggcg
gaagccggtgcctcgggcgcggccgccgaaggcgacgcgcagcaagcgccggccgacccg
ctggccgcgggcgtgccgggcaagacgcccgcgctcgaccagttcaccaccaacctcacg
cagcgcgcgaaggacggcgcgctcgacccggtcatcggccgcgacaccgagatccgccag
gtcatcgacatcctgatgcgccggcgccagaacaaccccatcctcacgggcgaggccggc
gtcggcaagacggccgtggtcgaagggctggcactgcgcatcgccgcgcaggacgtgccc
gagtcgctgcgcgccgtggcgctgcacacgctggacatgggcctgctgcaggccggcgcg
agcgtgaagggcgagttcgagaaccgcctgaagaacgtgatcgccgaagtgaagaagagc
ccgcacccgatcgtgctgttcatcgacgaagcccacaccatgatcggcgcgggcggccag
gccgggcagagcgatgcggccaacctgctcaagcccgcactcgcgcgcggcgagctgcgc
accatcgccgccaccacctggggcgagtacaagaagtacttcgagaaggacgcggcgctc
gcgcggcgcttccaggtcgtgaaggtcgaggagcccagcgagacgctggccgccgccatg
ctgcgcggcatggtgccgctgatggagaagcacttcaacatccgcgtgctcgacgaagcc
atcaccgaggccgtgcgcctgtcgcaccgctacatcagcggacggcaactgcccgacaag
gcggtcagcgtgctcgacacggcttgcgcgaaagtcgcgctgggccagagcgcgacgccg
gcgttgatcgaggaagcgaaccgcggcctcgaacgcatcgaggccgagagcgccgcgctg
gtacgcgacaccgcggccggcgggcgccatgaagcgcgcctggccgaactggcggaaaag
aagggtgcgctgcaggccgagctggccgccagccagcaacgcctggccgaagagaacgcg
ctggtcgaacgcatccgcgcgctgcgtgcgcaacgcgacgagtcggtcgcgcagcagccc
gaggccgcacccgccgtggcagagaaggcgccggcccgcgccgccagccgaaagaaaacc
gctgccaccgccgaccccgcgcgcgctgaactcgacgccctgctcgccgaactgcgcgca
ctgcaaggcaccacgccgatggtgccgctgcaggtcgacggccacgtcgtcgccgagatc
gtctcggcctggaccggcgtgccgctcggtcgcatggtcaaggacgagatcaagaccgtg
cgcgccctcgacaccctgctggccgagcgcgtcatcggccaggaccacgcactcgccgcc
gtggcccagcgcgtgcgcaccgcaagcgcgcgcctggaagaccccaacaagccgcgcggc
gtgttcatgttcgtcggcccctcgggcgtcggcaagaccgagaccgcgctcgcgctggcc
gacatcctgtacggcggcgagaagaagctcatcaccatcaacatgagcgagtaccaggag
gcgcacagcgtctcaggcctgaagggttcgccgcccggctacgtgggctacggcgaaggt
ggcgtgctcaccgaggccgtgcgccgccagccctacagcgtggtgctgctcgacgaggtc
gagaaggcccaccccgacgtgctggagatgttcttccaggtgttcgacaagggcatgatg
gacgacgccgagggccgcgagatcgacttccgcaacacgctgatcatcctcacctcgaac
atcggttcgtcgcagatcatgcaggcgtgcctcaacaaggccgacgacgagcgccccgcg
cccgacgcgctggccgacgccctgcgcccggtgctcatgaaggccttcaagccggccttc
ctgggccgcatgaaggtggcgccgttctatccgatcaccgacgcggtgctcgagcagatc
atcgcgctcaagctcggccgcatccgcgaccgcatcgcgaccaaccacaaggccgtgttc
gagtgggacgacgcgctggtcgaggccgtgctggcgcgctgcaccgaggtcgactcgggc
gcgcgcaatgtcgaccacatcctcaacggcaccttgctgcccgagatcgccgaggccgtg
ctcacgcgcatggccgacgagacgccgctggccaagatcaaggccagctgcggcaagggc
ggcgagttccgctaccggatcacctag

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