KEGG   Variovorax boronicumulans: CKY39_31655
Entry
CKY39_31655       CDS       T05068                                 
Symbol
icmF
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
vbo  Variovorax boronicumulans
Pathway
vbo03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vbo00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    CKY39_31655 (icmF)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vbo02044]
    CKY39_31655 (icmF)
Secretion system [BR:vbo02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   CKY39_31655 (icmF)
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical DUF3007 LPG_synthase_TM Wzy_C CdrL_M
Other DBs
NCBI-ProteinID: ATA57275
UniProt: A0A286NS79
LinkDB
Position
complement(6837569..6841435)
AA seq 1288 aa
MRRFFSFLADPRTLSVIGAIALGAFLLLGAQTLEVGAIWAVGIFVVLLLLWLLVWFVRRM
RTRAANRKLGDMLEDQADAAVRDSDPERKAEIDELRGRMVEAVKTIKTSKIGQMSGSEAL
YELPWYMVIGNPAAGKSSAILNSGLQFPFADKGNAVIQGIGGTRNCDWFFTTEGIVLDTA
GRYSIHQEDRKEWFGFLDLLKKYRPKAPINGIIITASIPELIGSRPDFAIQLAKNLRQRM
QELTERLEVFAPVYVMFTKADLITGFAEFFGDSDKMERDRVWGASLPYDGDEKQDAVALF
DKRFDELYMGLKEISVSHFANHRSSDPSPELLIFPLEFAAIKPALRAFLATLFESNPFQH
KPVFRGFYFTSALQEGTMRSLSTERIAKRFGLTLSNAATKSKEIYSQNGFFLRDLFSKVI
FADKKTVRQFSSPVKARVRYVSFFAFVAVLGLLLGGWTWSYLGNRQLVENVQADLDKVVK
LQASDNGLRTRFEALGILQDRIEQLEKFRNDRPLSLSLGLYQGNQLEDKLVAEYYGGVKQ
LMLAPVSDNLQAFLREVNAHPDRLKRADAVAALTGGAAPAPLPVAGAATTTAPAAAPEGG
GLYAGSSPADVQDAYNALKTYLMLSDKRQVETAHLTDQISRFWRGWLESNRGDMPRAAVI
RDAERMITFYLRRVGDDNWPALADTNLALVEQTRDNLRRVVRGMPARERVYAEIKARAST
RFAPMTVARILGATASSAEAEGTLAGSVAISGAFTREAWQQYVDDAIRDAANKETSSKDW
VLNVAGNDDLTLEGSPEQIRKTLATMYKLEYAKEWQRFLQGIAVKDMGSFEQAVVAMNQL
GDPQNSPIRKVFDTVYDQTSWDNPSLVNAGLQQARTGAFNWFKRLFSRATPSQVNVNVDL
NGGATEIPMGPIGREFAGVARLVVERDNTSLLRGYLGTLSKLRGRFNQIKNQGDPGPGAR
QLMQQTLEGNGSELADALKYVDEQMLTGMDAAQRQALRPLLVRPLLQAYAVTVQPTAVEV
NKIWSAQVHQPFQQSLATKYPFSASAKIEASPAEIAQFFGPEGAIGKFVTTTLGSLVIRR
GDLLSPRAWGDQGLTLSPDFVNGFAQWVAPLSGGAAAGAGGSAQPQTLFQILPQPVSGLT
EYMVEIDGQQLRYRNTPPQWSNFVWPNAQGTPGAKITAVTFDGRTVELINEPGNFGLERL
LSTAQRTKLPDGSFELTWARDNASVTVKLRVIQNTQSAGSGGDSPQGKGLRGTVLPSTVA
EIGVPRAAAPAAVQASAQAPVQAGGAGK
NT seq 3867 nt   +upstreamnt  +downstreamnt
atgcggcgattcttcagtttcctggccgatccgcgcaccttgtcggtgatcggcgccatc
gcgctcggcgcgttcctgctgctcggggcgcagacgctcgaagtcggcgcgatctgggcc
gtcggcatcttcgtggtgctgctgctgttgtggctgctggtgtggttcgtgcggcgcatg
cgcacgcgcgcggccaaccgcaagctcggcgacatgctcgaggaccaggccgacgccgcc
gtgcgcgacagcgaccccgagcgcaaggccgagatcgacgagctgcgcgggcgcatggtc
gaggcggtcaagaccatcaagacctcgaagatcgggcagatgtcgggcagcgaggcgctg
tacgagctgccctggtacatggtcatcggcaacccggcggcgggcaagagcagcgccatt
ttgaattcgggcctgcagttcccgttcgccgacaagggcaacgcggtgatccagggcatc
ggcggcacgcgcaactgcgactggttcttcaccaccgaaggcatcgtgctcgacacggcg
ggccgctattccatccaccaggaagatcgcaaggagtggttcggcttcctcgacctgctc
aagaagtaccggccgaaggcgcccatcaacggcatcatcatcacggccagcattcccgag
ctgatcggcagccggcccgacttcgcgatccagctcgccaagaacctgcgccagcgcatg
caggaactcaccgagcggctcgaagtgttcgcgccggtgtacgtgatgttcaccaaggcc
gacctgatcaccggctttgcagaattcttcggcgacagcgacaagatggagcgcgaccgc
gtgtggggcgcctcgctgccctacgacggcgacgagaagcaggacgccgtggcgctgttc
gacaagcgcttcgacgagctctacatgggcctgaaggaaatcagcgtttcgcacttcgcg
aaccaccgcagcagcgacccgtcgcccgagctcttgatctttccgctcgagttcgcggcc
atcaagcccgcgctgcgcgccttcctggccacgctgttcgagagcaaccccttccagcac
aagccggtgttccgcggcttctacttcaccagcgccttgcaggaaggcacgatgcgcagc
ctgtcgaccgagcgcatcgccaagcgcttcgggctcacgctgagcaacgcggccaccaag
tcgaaggaaatctattcgcagaacgggttcttcctgcgcgacctgttctccaaggtgatc
tttgccgacaagaagacggtgcggcagttctccagccccgtgaaggcgcgcgtgcgctac
gtgagcttcttcgccttcgtcgccgtgctgggcctgctgctgggcggctggacctggtcg
tacctcggcaaccgccagctggtggagaacgtgcaggccgacctcgacaaggtggtcaag
ctgcaggccagcgacaacggcctgcgcacgcgcttcgaggcgctgggcatcctgcaggac
cgcatcgagcagctcgagaaattccgcaacgaccggccgctgtcgctgtcgctgggcctg
taccagggcaaccagctcgaagacaagctcgtggccgagtactacggcggcgtgaagcag
ctcatgctcgcgccggtgtcggacaacctacaggccttcctgcgcgaggtgaacgcgcac
cccgaccgcctgaagcgcgccgacgcggtggccgcactgacgggcggcgcagcgcccgcg
ccgttgccggtcgctggtgccgcgaccaccacggcacccgccgcagcgccggagggcggc
ggcctgtatgccggctcctcgccggccgatgtgcaggacgcctacaacgcgctcaagacc
tacctcatgctgtccgacaagcggcaggtggaaacggcgcacctcaccgaccagatctcg
cgcttctggcgcggctggctggagagcaaccgcggcgacatgccgcgcgcggcggtcatc
cgcgatgccgagcgcatgatcaccttctacctgcgccgcgtgggcgacgacaactggccc
gcgctggccgacaccaacctggcgctggtcgagcagacgcgcgacaacctgcgccgcgtg
gtgcgcggcatgccggcgcgcgaacgcgtgtacgccgagatcaaggcgcgcgcctccacg
cgcttcgcgccgatgaccgtggcgcgcatcctcggggccacggccagcagcgcggaagcc
gaaggcacccttgccggcagcgtcgccatctcgggcgcgttcacgcgcgaggcctggcag
cagtacgtggacgacgcgatccgcgacgccgcgaacaaggaaacctccagcaaggactgg
gtgctcaacgtcgctggcaacgacgacctgacgctcgaaggcagcccggagcagatccgc
aagacgctggccaccatgtacaagctggagtacgccaaggagtggcagcgcttcctgcag
ggcatcgcggtgaaggacatgggcagcttcgagcaggccgtggtggcgatgaaccagctc
ggcgatccgcagaactcgccgatccgcaaggtcttcgacacggtgtacgaccagacctcg
tgggacaacccctcgctggtcaacgccggcctgcagcaggcgcgcaccggggccttcaac
tggttcaagcgcctcttcagccgcgccacgccgtcgcaggtcaacgtgaacgtcgacctc
aacggcggcgccacggaaatcccgatgggcccgatcgggcgcgagttcgcgggcgtggcg
cgcctggtggtcgagcgcgacaacacctcgctgctgcgcggctacctgggcacgctgtcc
aagttgcgcgggcgcttcaaccagatcaagaaccagggcgaccccggaccgggcgcgcgc
cagctcatgcagcagacgctggaaggcaacggctccgagctggccgacgcgctcaagtac
gtcgacgagcagatgctcaccggcatggacgccgcgcagcgccaggcgctgcgtccgctg
ctggtgcggccgctgctgcaggcctacgcggtgacggtgcagccgaccgcggtggaggtc
aacaagatctggagtgcgcaggtgcaccagcccttccagcagtcgctggccaccaagtac
ccgttctcggcgagcgcgaagatcgaggcctcgccggcagagatcgcgcagttcttcgga
cctgaaggcgccatcggcaagtttgtgacgaccacgctgggctcgctggtgatccgccgc
ggcgacctgctgtcgccgcgcgcctggggcgaccagggcctcacgttgagccccgatttc
gtgaacggctttgcgcagtgggtggcgccgctgtcgggcggtgccgcggccggtgccggc
ggcagcgcgcagccgcagacgctgttccagatcctgccgcagcccgtgtcgggcctgacg
gagtacatggtggaaatcgacggccagcagctgcgctaccgcaacacgccgccgcagtgg
tccaacttcgtctggcccaacgcgcaaggcacgccgggcgcgaagatcaccgccgtcacc
ttcgacgggcgcacggtcgagctgatcaacgagccgggcaacttcggcctggagcgcctg
ctgagcacggcgcagcgcaccaagttgcccgacggcagcttcgagctcacctgggcgcgc
gacaacgcgagcgtgaccgtcaagctgcgcgtgatccagaacacgcagtcggccgggtcg
ggtggcgattcgccgcagggcaagggcctgcgcggcacggtgctgccgtcgacggtcgcg
gagatcggtgtgccgcgcgcagcagcacccgcagcggttcaggcatcggcccaggcgccg
gtgcaggcagggggagcaggcaaatga

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