Variovorax boronicumulans: CKY39_32065
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Entry
CKY39_32065 CDS
T05068
Symbol
secD
Name
(GenBank) protein translocase subunit SecD
KO
K03072
preprotein translocase subunit SecD
Organism
vbo
Variovorax boronicumulans
Pathway
vbo03060
Protein export
vbo03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
vbo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
CKY39_32065 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
CKY39_32065 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
vbo02044
]
CKY39_32065 (secD)
Secretion system [BR:
vbo02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
CKY39_32065 (secD)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD-TM1
SecDF_P1_head
SecD_1st
SecD_SecF_C
MMPL
ACR_tran
Sec_GG
DUF7217
Motif
Other DBs
NCBI-ProteinID:
ATA57348
UniProt:
A0A1E7TY74
LinkDB
All DBs
Position
complement(6925270..6927153)
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AA seq
627 aa
AA seq
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MNRYPVWKYTIIVIVLLVGLIYALPNFFGEAPAVQVSAAKTTVKVDAATQTRVEEALKAA
GLTPDLVTLDAGSLRARFTTTDDQLKARDVVQRALVPDASDPPYTVALNLLSRSPKWLTS
LHAFPMYLGLDLRGGVDFLLQVDMKGAIDKKAESFASDLRTTFRDKSIRGTQVSRNGQTV
EVTFRDAASLETAKRLIVDQFPDLSTTDTQDGTNWRLTATIKPEAARRLQDAALKQNITT
LHNRINELGVAEPVIQQQGLDRIVVQLPGVQDTAKAKEILGRTATLEMRMVDESAEGRAA
ELSGAPVPFGSEKFLDRGGRPVIVKKQVLVTGENLTDAQPGFDQQSNQPKVDLTMDAKGG
RIMRDVSRENYKKRMAMLIFEKGKGEVLTAPSINGELGNRFQVSGSMTVAEASDLALLLR
AGSLAAPMEIIQERTIGPTLGADNIEKGFKSVMYGFLAIMVFMCAYYALFGLFSSIALAV
NLMLLVAILSMLQATLTLPGIAAMALAIGVAIDSNVLINERVREELRNGASPQAAIHAGY
DRAWGTILDSNVTTLIAGIALLAFGSGPVRGFAVVHCIGIVTSMFSAVFFSRGLVNFWYG
QKKKLKSVSIGTVWRPKTDGTAVVDTK
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgttacccggtctggaagtacacgatcatcgtgatcgtgctgctcgtggggctc
atctacgccctgcccaatttcttcggcgaggcacccgcggtgcaggtgtccgcggccaag
acgaccgtcaaggtcgatgccgccacccagacccgggtcgaggaggcgctgaaggcggcc
ggcctgacgcccgatctggtgacgctggacgccggctcgctgcgcgcccgcttcaccacc
accgacgaccagctcaaggcgcgcgacgtcgtgcagcgcgccctggtgcccgacgccagc
gacccgccctacacggtggcgctgaacctgctgtcgcgttcgcccaagtggctcacgtcg
ctgcatgcgttcccgatgtacctgggcctggacctgcgcggcggcgtcgacttcctgctg
caggtcgacatgaagggcgccatcgacaagaaggccgaatcgttcgcgagcgacctgcgc
accaccttccgcgacaagagcatccgcggcacccaggtcagccgcaacggccagaccgtc
gaggtgaccttccgcgacgcggcctcgctggagaccgccaagcgcctgatcgtggaccag
ttccccgacctcagcaccaccgacacgcaagacggcaccaactggcgcctgaccgccacc
atcaagcccgaggcggcccgccgcctgcaggacgccgcgctcaagcagaacatcacgacc
ctgcacaaccggatcaacgaactcggcgtggccgagccggtgatccagcagcagggcctg
gaccgcatcgtcgtgcagctgcccggcgtgcaggacacggccaaggccaaggaaatcctg
ggccgcaccgccacgctcgagatgcgcatggtcgacgaaagcgccgaaggccgcgcggcc
gagttgagcggcgcgcccgtgcccttcggctccgagaaattcctcgaccgcggtggtcgc
ccggtgatcgtgaagaagcaggtgctcgtcaccggcgagaacctcaccgacgcccagccc
ggcttcgaccagcagagcaaccagcccaaggtcgacctgaccatggacgccaagggcggt
cgcatcatgcgcgacgtcagccgcgagaactacaagaagcgcatggccatgctgatcttc
gagaagggcaagggcgaagtgctcacggccccgtcgatcaacggcgaactgggcaaccgc
ttccaggtctcgggttcgatgacggtggccgaagccagcgacctggccctgctgctgcgc
gccggctcgctggccgcgcccatggagatcatccaggagcgcacgatcggcccgacgctc
ggcgccgacaacatcgaaaaaggcttcaagagcgtgatgtacggcttcctggccatcatg
gtcttcatgtgtgcctactacgcgctgttcggcctgttctcgtcgatcgcgctggccgtg
aacctgatgctgctggtcgccattctgtcgatgctgcaggccacgctcacgctgcccggc
atcgcggccatggcgctggccatcggcgtggccatcgactccaacgtgctgatcaacgag
cgcgtgcgcgaagagctgcgcaacggcgcttcgccgcaggccgccatccacgcgggctac
gaccgcgcctggggcacgattctcgactccaacgtgaccacgctgatcgcgggcattgcg
ctcttggccttcggctcgggcccggtgcgcggcttcgcggtggtgcactgcatcggcatc
gtcacctcgatgttctccgccgtgttcttctcgcgtggcctcgtgaacttctggtacggc
cagaagaagaagctcaagtctgtgtcgatcggcaccgtctggcggcccaagaccgacggc
acggccgtggtcgacaccaagtaa
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