Variovorax boronicumulans: CKY39_32825
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Entry
CKY39_32825 CDS
T05068
Symbol
pbpC
Name
(GenBank) penicillin-binding protein 1C
KO
K05367
penicillin-binding protein 1C [EC:
2.4.99.28
]
Organism
vbo
Variovorax boronicumulans
Pathway
vbo00550
Peptidoglycan biosynthesis
vbo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vbo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CKY39_32825 (pbpC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
vbo01003
]
CKY39_32825 (pbpC)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vbo01011
]
CKY39_32825 (pbpC)
Enzymes [BR:
vbo01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
CKY39_32825 (pbpC)
Glycosyltransferases [BR:
vbo01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
CKY39_32825 (pbpC)
Peptidoglycan biosynthesis and degradation proteins [BR:
vbo01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
CKY39_32825 (pbpC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
BiPBP_C
Motif
Other DBs
NCBI-ProteinID:
ATA58021
UniProt:
A0A250DVA5
LinkDB
All DBs
Position
complement(7087088..7089352)
Genome browser
AA seq
754 aa
AA seq
DB search
MAFLLALLRLWPHAPLSETVGSSRAVYAQGGELLRLTLASDEQYRLWVPLDRISPTLVDA
VLLYEDRRFYAHPGVNPAALVRSAWRIASGERRQGGSTLTMQLARRVYGIDSRTAMGKIA
QIGAALWLEARFSKREILEAYLNTAPYGGNIEGVQAASLIYFRKDAAKLSLPEALTLAVI
PQNPVKRIAERGRNAELQSARERLWALWAERDPTAKQHAPDAQLALSAQSRGSLPFLAPH
ATDMLLAQERGVQEVRTTIDLRMQATLERVMGQYLRTHADVGMTNASALLLDASTMQVRA
LIGSADWHNDAIAGQVNGTQAKRSPGSTLKPFIYALALDQGLLHPKTMLKDAPTSFGPYT
PENFDHRFAGPLPAQEALIRSRNIPAVAVAAKLSKPGLYDFMRLAGVQKLQSESHYGLAL
VLGGGEVTPEELAGLYATLANGGISQPLRYTQPAPDERPVQPLRLLSEEASFITLDMLRH
TPRPDTTLPARPAIAWKTGTSWGFRDAWTAGVFGRHVLVVWVGNFDGTSNPALVGVDAAA
PLFLRMVDALRAERLDPGEIATRQPPDLRQVEVCTATGGLPDALCPVRTTTWFIAGKSPI
QVSNLHRAVWVDETTGKVVCGPQPNARQQVVEQWGSDMRRLFRQAGLPRASLPTDGCEKG
EASETAPLITSPLRGVRHTLRVKKPEPLVLRAEAAAGTQTIYWFADDALVGKAAPGEGIT
WMPDMAESGRRYVLRAVDDQGRAESREVTVDIAP
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
gtggccttcctgctcgccttgctgcgcctgtggccgcacgccccgctcagtgaaaccgtc
ggcagctcgcgtgccgtgtatgcgcaaggcggagagctgctgcgcctcaccctcgcaagc
gacgagcaataccgcctctgggtgccgctcgaccgcatctcgccgacgctggtcgatgcc
gtgctgctgtacgaagaccgccgcttctacgcgcaccccggcgtcaaccccgccgcgctc
gtgcgcagcgcgtggcgcattgcgagcggcgagcgccggcagggcggctcgacgctcacc
atgcagctggcgcggcgcgtctacggcatcgacagccgcacggccatgggcaagatcgcg
cagatcggcgcggcgctctggctcgaagcgcgcttcagcaagcgcgagatcctcgaggcg
tacctcaacaccgcgccctatggcggcaacatcgaaggcgtgcaggccgcgagcctcatc
tacttccgcaaggacgccgccaagctcagcctgcccgaggcgctgacgctcgcggtgatt
ccgcagaaccccgtcaagcgcattgccgagcgcggtcgcaatgccgagctgcagtcggca
cgcgaacgcctgtgggcgctgtgggccgagcgcgatccgaccgcgaagcagcatgcgccc
gatgcgcaactcgcgctctcggcacagtcgcgcggcagcctcccctttctcgcgccgcat
gccaccgacatgctgctcgcgcaggagcgtggtgtgcaggaggtgcgcaccaccatcgac
ctgcgcatgcaagccacgctcgaacgcgtgatgggccagtacctgcgcacgcatgccgac
gtgggcatgaccaacgcgagcgcactgctgctcgacgcttcgaccatgcaggtgcgcgcg
ctgatcggttcggccgactggcacaacgacgccatcgcggggcaggtcaacggcacgcag
gccaagcgctcgccggggtccacgctcaagcccttcatctacgcactcgcgctcgaccag
ggcctgctgcatccgaagacgatgctgaaggacgcgccgacatcgttcggcccctacacg
cccgagaacttcgaccaccgcttcgcgggcccgctgcccgcgcaggaggcgttgatccgc
agccgcaacatccccgcggtggccgtggccgcgaagctgtcgaagccggggctctacgac
ttcatgcggctcgcgggcgtgcagaagctgcagagcgaatcgcactacggcctcgcgctg
gtgctgggcggcggcgaagtcacgcccgaggagcttgcgggcctctacgccacgctcgcg
aacggcggcatctcgcagccgctgcgctacacgcagcccgcgcccgacgagcggccggtg
cagccgttgcgcctcttgagcgaagaggcctcgttcatcacgctggacatgctgcgccac
acgccgcgccccgacaccacgctgcccgcgcgccccgccatcgcgtggaagacgggcacg
tcgtggggctttcgcgatgcgtggaccgcgggtgtgttcggccgccatgtgctcgtggtg
tgggtcggcaacttcgatggcacgagcaaccccgcgctggtgggcgtcgatgcggccgcg
ccgctgttcctgcgcatggtcgatgcgctgcgcgcggagcggctcgatcccggcgagatc
gcgacgcgccagccgccggacctgcgccaggtcgaggtctgcaccgcgacgggcggactg
cccgatgcgctgtgcccggtgcgcaccaccacatggttcatcgccggcaagtcgccgatc
caggtgagcaacctgcaccgcgccgtgtgggtcgacgagacgaccggcaaggtggtgtgc
gggccgcagcccaacgcgcgccagcaggtggtcgagcaatggggcagcgacatgcggcgg
ttgttccgccaggcgggcctgccgcgcgcgagcctgccgaccgatggctgcgagaagggc
gaggcttcggagacggcgccgctcatcacctcgcccttgcgcggcgtgcggcacacgctg
cgcgtgaagaagcccgagccgctcgtgctgcgcgccgaagcagcggcgggcacgcagacg
atctactggttcgccgatgacgccctggtcggcaaggcggcgcccggcgaaggcatcacg
tggatgcccgacatggccgaatcgggacggcgctacgtgctgcgcgcggtcgatgaccag
ggccgcgccgagtcgcgtgaagtgacggtggacatcgcaccttga
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