Vibrio breoganii: A6E01_00830
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Entry
A6E01_00830 CDS
T04649
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
vbr
Vibrio breoganii
Pathway
vbr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vbr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A6E01_00830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vbr03400
]
A6E01_00830
Enzymes [BR:
vbr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
A6E01_00830
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
A6E01_00830
DNA repair and recombination proteins [BR:
vbr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
A6E01_00830
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
ANO31831
UniProt:
A0AAN0XSP8
LinkDB
All DBs
Position
1:168648..169460
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AA seq
270 aa
AA seq
DB search
MPELPEVEVSRMGISPHITGQTIKKLVVRQRQLRWPVPEKLEQLQGVVIEAVERRAKYLL
LRTEQGSIVVHLGMSGSLRIQDSSLEPTKHDHVDLVLENDKMLRYNDPRRFGSWQWVGND
ESLALLDNLGPEPLSDEFCTEHIILLAAKRRVAVKQFIMDNKVVVGVGNIYANESLFNAR
IHPLRPANSLTYDEWGLLVDEIKLVLANAIKQGGTTLNDFEQPDGKPGYFAQQLQVYGRA
GEACPVCKTEISQKMVGQRNTFWCDHCQIE
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagttacccgaagtagaagtctcccgaatgggcatcagcccgcacatcactggt
caaacaataaagaagctggtggtgcgtcagcgacagctgcgatggcctgtacctgaaaag
ctagagcagttacaaggcgtggtgattgaagcggttgagcgtcgagctaagtatctactg
ctaagaacggagcaaggaagcatagtggtccaccttgggatgtctggctcccttcgtatt
caagattcaagtctagaaccaactaagcatgatcacgtggatctggtgctagaaaatgac
aagatgctacgctacaacgatccccgccgctttggctcatggcaatgggtcggtaatgac
gagtcgttagcgcttttagacaacctaggtcctgagcctctctctgatgaattctgcact
gaacatattattctactagcggcaaagcgccgtgtggcagtaaagcagttcataatggat
aataaggtggtagtgggtgtcggtaatatctacgccaatgaatctctttttaatgctaga
attcatccattaagacctgcaaattcattgacttatgatgagtggggattgctggtggac
gagattaagctagtgctggcgaacgccattaaacaaggcggcaccacgttaaatgacttt
gaacagccagatggcaagccaggctactttgctcagcagttacaagtctatggtcgtgca
ggcgaggcatgccctgtctgcaaaacagaaattagtcagaagatggtcgggcagagaaat
accttttggtgtgatcattgtcagattgaatga
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