Vibrio breoganii: A6E01_02310
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Entry
A6E01_02310 CDS
T04649
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
vbr
Vibrio breoganii
Pathway
vbr03410
Base excision repair
vbr03430
Mismatch repair
vbr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vbr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A6E01_02310
03430 Mismatch repair
A6E01_02310
03440 Homologous recombination
A6E01_02310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vbr03400
]
A6E01_02310
DNA repair and recombination proteins [BR:
vbr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
A6E01_02310
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
A6E01_02310
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
A6E01_02310
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
ANO32120
UniProt:
A0AAN1CR41
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All DBs
Position
1:481956..483695
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AA seq
579 aa
AA seq
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MIEIKRRPAADISNLPTTLSALMRRIYAARGIESSVQLERGAKGLLPPQKLHGIKAAAEL
LLSAIKENKRIIVVGDFDADGATSSALSVLALRMLGSSNVDYLVPNRFEDGYGLSPEVVE
QAIEMGVDLIMTVDNGVSSIEGVRFAKQNNIQVLVTDHHLPGHVLPEADAMVNPNLHECD
FPSKALAGVGVAFYLMVALRALMRQTNWFSDSGVAEPNLTELLDLVALGTVADVVPLDEN
NRILVHQGLQRIRAGLGRPGIQALIEVSKRESSRLVASDFGFALGPRINAAGRLDDMSFG
VELLMCNNIHAARRMATELDALNITRREIEEGMKQEALAFCERLQFSSDQEMPYGITLFQ
RDWHQGVIGILASRIKDKFHRPVIAFADGGDGFIKGSCRSIKGLHMRDALDKIDVQNPGL
ILKFGGHAMAAGLTIKEADFTRFSELFDQAVRDEVDEHALKGIVLSDGELTPEEFNMHTA
MEIRNGGPWGQAFPEPIFDGEFKVLHQKLVGEKHLKLMLEPLHKSHATNIMIDAIAFNVD
LRRWPDPATTKIKMAYRLDINEFRGNQSLQLMVEHIDAA
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgatcgagattaaacgtcgtcccgctgctgatatttccaatctgcccacaacactgtct
gcattgatgcgacgcatttatgccgctcgtggtatcgagtcttcggtgcaactagagcgc
ggcgctaaaggattgcttccaccacagaagcttcatggcatcaaagcggcagcagagctg
ttgcttagtgctattaaagagaacaagcgcattattgtggttggagattttgatgcggat
ggcgcaacctcttcggcattgtcagtgctagcgctgcgtatgctaggttcgagcaatgtt
gattatcttgtgccgaaccgtttcgaagatggctatggcttaagtcctgaggtggtggaa
caagccattgagatgggcgttgatctcatcatgacagtagacaatggcgtttcgtctatt
gaaggggtgcgatttgccaagcaaaacaacattcaagtattggtgaccgaccatcacttg
ccagggcatgtcttgcctgaagccgatgccatggtgaacccaaaccttcatgaatgcgat
tttccatccaaggcattagccggggttggtgttgctttttatttgatggtggcgctaaga
gcactgatgcgccaaacaaactggttcagtgattctggcgtggcagagcctaaccttacg
gaactgctcgatttggtggcgctaggtaccgtcgctgatgttgtgcctctggatgagaac
aatcgaatcttggtacatcaaggtctgcagcgcattagagcgggcctaggtcgtcccggt
attcaggcattgattgaggtatcaaagcgagaatctagccgcttagtggcgtctgatttt
ggctttgcattagggccgcgtattaacgcggctggacgcttggatgatatgtcgtttggt
gtagagctattgatgtgcaataacattcatgccgccagacgtatggccactgaacttgat
gcgcttaatatcactcgtcgcgaaatcgaagagggaatgaagcaagaggcgctcgccttt
tgtgagcgattgcagttcagctccgatcaagaaatgccctatggaattacgctattccaa
cgtgattggcaccaaggggtgattggtatccttgcttcaagaatcaaagataaattccat
cgacctgtcatcgcatttgccgatgggggggatgggtttattaagggatcctgtcgttca
atcaaagggctgcacatgcgggatgccttagacaagattgacgtacaaaacccgggatta
atcctaaagtttggtggacacgccatggctgcgggtttgaccattaaagaggcggatttt
actcgctttagtgagctgtttgaccaagcagtgcgagatgaggtggatgaacacgcctta
aagggcatagttttgtcggatggtgagttaacaccggaagagttcaacatgcacaccgca
atggagatccgcaatggtggtccttggggacaagcctttcctgagccaatctttgatggt
gagtttaaggtgttgcaccaaaagctagtgggcgagaagcaccttaagctgatgcttgag
cctttgcacaaatctcatgccaccaacattatgattgatgcgattgccttcaacgtcgat
ctgcgccgctggccagatcctgcaaccactaagatcaaaatggcctatcggcttgatatc
aatgagtttagaggcaaccaatcactacagcttatggttgaacatattgatgctgcctaa
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