Vibrio breoganii: A6E01_03040
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Entry
A6E01_03040 CDS
T04649
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
vbr
Vibrio breoganii
Pathway
vbr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vbr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
A6E01_03040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vbr03400
]
A6E01_03040
Enzymes [BR:
vbr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
A6E01_03040
DNA repair and recombination proteins [BR:
vbr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A6E01_03040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
SLFN-g3_helicase
AAA_25
AAA_11
AAA_12
ResIII
DUF3799
Motif
Other DBs
NCBI-ProteinID:
ANO32247
UniProt:
A0AAN0XTB4
LinkDB
All DBs
Position
1:646399..649983
Genome browser
AA seq
1194 aa
AA seq
DB search
MTNDAQILPAPLETMTFPLHGARLIEASAGTGKTFTIAGLYLRLLLGHGDNDSAHQTPLT
VEQILVVTFTEAATAELKDRIRARIHQARVAFSRGHSDDPVIKPLLEQTDDRDRACELLL
AAERQMDEAAVYTIHGFCQRMLTQNAFESGSRFKSQFIKDETQLKEQVVADYWRRHFYGM
SASMVSEIRSHWKTPQALYADLNNFISGNEVYIHSEVEKGDLETLYAERIAVLAELQKQW
SADSADFEKLIMESGITKNPYNKKNVPNWIGQIDSWAAKPLTSIAVPECLERFSSSTLQA
KTKPDKQAPEHVVFDHIDEYCSLPALEVKQAILSNAIPECRAELQKSKGQQQKLSFDDLL
SQLDYALQADDEGLLSERIRGLYPVAMIDEFQDTDPQQYNIFRHLYLQHPECGLFMIGDP
KQAIYAFRGADIFTYIRARKEVTSHFNLTTNWRSSKDMVEASNALFQEAESAFIYDDDIP
FTAVSASPGADQKSWSLNGETQSAMTVWLKENEGEAVAKGDYNQSMAQSTATQIQRLLSA
SDTGNALLHGSKDERIQAGNIAVLVRTGREANLVRRALSEKGVASVYLSNRDSVFASPVA
SDVLLFLRAALHFDNDRALRTAAASSLFDLSLFDLERLNQDEQYWELLSQEFSDYRQLWL
KAGIMPMIRKLIQYRELAQRLQNEHQGERILTDLMHLAELLQQASAELESDHALLRWFEE
HIFEAGSGDAGDEQKQRLESEKNLVQVVTIHKSKGLEYDIIFVPFVSAFRKSDKALYYDA
EQHRTRFDLDNNSEGIALSDKERLAEDLRLIYVAVTRAVYGCYLGVAPLKEGRSKKASAH
LSAIGYLLQGAEAQEASALSSALHVLENSYPSIQVCEPLAWDDVRYQAPHVEQSLLQASK
MQQQIDWRWRMTSYSGLVKQGHGSSHKDESVWLDTSLDIDASDDQTPLLDLNKKTMFNFP
RGARPGTFLHTLFEEVEYTESAFTADNEEIIKQLLIKEQLDEEWLPVLQQMIDKVLNTDL
DGSGIKLSEKQPQQRLVEMEFLLPIEILSAQRFNAITHKHDSLTAQAGDLGFAPVEGMLK
GFIDLVFEHQGKYYVLDWKSNHLGDNAEDYHQKSLDEAMIGHRYDAQYQVYALALHRFLK
SRLQDYSYETHFGGCFYLFLRGMDGSGDYGVFHAKPSQQMLEELDAHIRGEEAI
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atgacaaatgatgcgcaaattcttcctgcgccgcttgagacaatgacatttcctttgcat
ggcgcacgcttaattgaggcatctgcgggcacgggaaagacctttaccattgccggactc
tatctaaggctgttattgggacacggcgataacgactcagcgcaccaaacaccacttact
gtagagcagatcttggtggtgacctttactgaggcggcaaccgcagagctcaaagatcgc
attcgtgcgcggatccaccaagcacgggtggcgtttagccgaggtcatagtgatgatcct
gtgatcaagccactgttagaacaaacggatgatcgcgatcgcgcctgtgaattgttactg
gctgccgagcggcagatggatgaagccgcagtttataccattcatggattttgccagcgc
atgctgacacaaaatgcgttcgagtcgggtagccgcttcaaaagccaatttattaaagat
gaaacccagctaaaagaacaagtggtggccgattattggcgtcgccatttctatggtatg
agcgccagcatggtgtcagagatccgcagtcactggaaaacaccgcaagccctgtacgcg
gatctgaataattttatcagtggtaatgaggtctacattcactcagaggttgaaaaggga
gacctagaaaccctgtatgctgagcgtattgccgttcttgccgagctccagaagcaatgg
tcagcagacagcgctgactttgaaaagttgattatggaatctgggatcaccaaaaatccc
tacaacaagaagaacgtaccgaactggataggacagattgatagttgggcagcaaaacca
ctcaccagtattgctgtgcctgagtgcttggagcgctttagctccagcacgctgcaagcc
aagactaaacctgacaagcaagcgccagagcatgtggtatttgatcatattgatgaatac
tgctcattgcctgctcttgaggtgaagcaggctatcctaagcaatgccattcccgaatgt
cgtgccgagttgcaaaaatcaaagggacagcagcagaaattgtcctttgatgatctgcta
agccagctcgactatgccttgcaagcggacgatgaagggctgttgtccgagcgtattcgc
gggctatatcccgttgcgatgattgatgagtttcaagatacggatcctcagcaatacaac
atttttagacatctctacctgcagcatcctgagtgtggattgttcatgattggtgaccct
aagcaggccatctatgcctttcgcggcgccgatatttttacctatatccgcgcacgtaaa
gaggtgacctcgcactttaatctcaccaccaactggcgctccagcaaagatatggtagag
gcgagtaacgcgctgtttcaagaggctgaatctgcgtttatttatgatgatgacatccct
tttactgccgtctctgcaagcccgggagcggatcaaaagtcgtggtcgctcaatggtgaa
actcaatcagccatgacggtttggctgaaggagaacgagggcgaagcggtagcaaagggc
gattataaccaaagcatggcgcagtccaccgccacgcaaatacagcgcctgttaagcgca
tccgatactggcaatgcactgctgcatggctccaaagatgagcgaattcaagcgggcaat
atagcagtgctggtgcggacagggcgcgaggcgaatttggttcgtagagcactgtcagag
aaaggcgttgctagtgtgtatctctccaacagagacagcgtttttgcaagcccagtggcc
agtgatgtgttgctatttctacgtgcagcattgcactttgataacgacagagcactgcgc
acagccgccgccagttccttgtttgacctttctctatttgatctagagcgcttgaatcaa
gatgaacaatactgggaactgctgagccaagagtttagtgattaccgacagttgtggctg
aaggccgggatcatgccgatgatccgtaagctaatccaatatagagagctagcccaaagg
ctacaaaatgagcatcagggggagcgaatacttaccgatctcatgcatctggctgagctg
ttgcaacaagcctcagcagagctagaaagtgatcatgctctgctgcgttggtttgaagag
cacatctttgaagcgggcagtggtgatgctggagacgaacagaagcagcgcttggagtcg
gaaaagaacttggttcaggtggtgaccatccacaaatccaaaggcttggaatacgacatt
atttttgttccctttgtcagtgcttttagaaaaagtgacaaggcactgtattacgacgct
gagcagcatcgcacgcgatttgatctggataataatagcgagggtattgcgctttcagat
aaagagaggcttgccgaggatttgcgtcttatctatgttgcggtcactcgtgcggtctat
ggttgctatctcggcgttgcgccgctaaaggaaggtcgtagtaaaaaagccagcgcacac
ctgagtgcgattggttatttgttgcagggtgcagaagcgcaagaagcctcagcgctctct
agtgctctgcatgtgttagaaaacagctatccatcaatacaggtttgtgaaccgcttgcc
tgggatgacgttcgctatcaagccccacacgttgagcagtccctgttacaagctagtaag
atgcaacaacagatagattggcgctggagaatgaccagttactcggggctggtgaaacaa
gggcatggctcaagccacaaagacgagagtgtttggttggatacaagcttagatattgat
gcctctgatgatcaaacgccactgcttgatttgaacaaaaagaccatgttcaacttcccg
cgcggtgcgagacccggcaccttcttgcataccctgtttgaagaggttgaatatacagag
tcagcctttaccgcagacaatgaagagatcatcaagcagcttctgatcaaagagcagcta
gatgaagaatggctgccagtactgcaacagatgatcgataaggtgctcaataccgaccta
gatggcagtggaatcaaactatcggaaaaacagccacagcaacgactagtagagatggag
tttcttcttcccatcgaaatcttgtccgctcagcggtttaatgccatcacccataagcat
gactctttaactgcgcaagccggagatttgggctttgctcctgtagagggaatgttgaaa
gggttcatcgatttagtgtttgagcatcaagggaaatactatgtactggactggaaatcc
aatcaccttggagacaacgcagaagactatcatcagaaaagcctcgatgaggcgatgatc
ggtcatcgctatgatgcgcagtatcaagtctatgccttagccctacaccgattcttaaaa
agccgactacaagactactcatacgagactcattttggtgggtgtttttatctattcttg
cgcggtatggatggcagcggtgactatggtgtctttcatgccaagccatcgcaacaaatg
ctagaggaactggatgcacatattcgtggcgaggaggctatctaa
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