KEGG   Vibrio breoganii: A6E01_03040
Entry
A6E01_03040       CDS       T04649                                 
Name
(GenBank) exodeoxyribonuclease V subunit beta
  KO
K03582  exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
Organism
vbr  Vibrio breoganii
Pathway
vbr03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vbr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    A6E01_03040
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vbr03400]
    A6E01_03040
Enzymes [BR:vbr01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     A6E01_03040
DNA repair and recombination proteins [BR:vbr03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     A6E01_03040
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PDDEXK_1 SLFN-g3_helicase AAA_25 AAA_11 AAA_12 ResIII DUF3799
Other DBs
NCBI-ProteinID: ANO32247
UniProt: A0AAN0XTB4
LinkDB
Position
1:646399..649983
AA seq 1194 aa
MTNDAQILPAPLETMTFPLHGARLIEASAGTGKTFTIAGLYLRLLLGHGDNDSAHQTPLT
VEQILVVTFTEAATAELKDRIRARIHQARVAFSRGHSDDPVIKPLLEQTDDRDRACELLL
AAERQMDEAAVYTIHGFCQRMLTQNAFESGSRFKSQFIKDETQLKEQVVADYWRRHFYGM
SASMVSEIRSHWKTPQALYADLNNFISGNEVYIHSEVEKGDLETLYAERIAVLAELQKQW
SADSADFEKLIMESGITKNPYNKKNVPNWIGQIDSWAAKPLTSIAVPECLERFSSSTLQA
KTKPDKQAPEHVVFDHIDEYCSLPALEVKQAILSNAIPECRAELQKSKGQQQKLSFDDLL
SQLDYALQADDEGLLSERIRGLYPVAMIDEFQDTDPQQYNIFRHLYLQHPECGLFMIGDP
KQAIYAFRGADIFTYIRARKEVTSHFNLTTNWRSSKDMVEASNALFQEAESAFIYDDDIP
FTAVSASPGADQKSWSLNGETQSAMTVWLKENEGEAVAKGDYNQSMAQSTATQIQRLLSA
SDTGNALLHGSKDERIQAGNIAVLVRTGREANLVRRALSEKGVASVYLSNRDSVFASPVA
SDVLLFLRAALHFDNDRALRTAAASSLFDLSLFDLERLNQDEQYWELLSQEFSDYRQLWL
KAGIMPMIRKLIQYRELAQRLQNEHQGERILTDLMHLAELLQQASAELESDHALLRWFEE
HIFEAGSGDAGDEQKQRLESEKNLVQVVTIHKSKGLEYDIIFVPFVSAFRKSDKALYYDA
EQHRTRFDLDNNSEGIALSDKERLAEDLRLIYVAVTRAVYGCYLGVAPLKEGRSKKASAH
LSAIGYLLQGAEAQEASALSSALHVLENSYPSIQVCEPLAWDDVRYQAPHVEQSLLQASK
MQQQIDWRWRMTSYSGLVKQGHGSSHKDESVWLDTSLDIDASDDQTPLLDLNKKTMFNFP
RGARPGTFLHTLFEEVEYTESAFTADNEEIIKQLLIKEQLDEEWLPVLQQMIDKVLNTDL
DGSGIKLSEKQPQQRLVEMEFLLPIEILSAQRFNAITHKHDSLTAQAGDLGFAPVEGMLK
GFIDLVFEHQGKYYVLDWKSNHLGDNAEDYHQKSLDEAMIGHRYDAQYQVYALALHRFLK
SRLQDYSYETHFGGCFYLFLRGMDGSGDYGVFHAKPSQQMLEELDAHIRGEEAI
NT seq 3585 nt   +upstreamnt  +downstreamnt
atgacaaatgatgcgcaaattcttcctgcgccgcttgagacaatgacatttcctttgcat
ggcgcacgcttaattgaggcatctgcgggcacgggaaagacctttaccattgccggactc
tatctaaggctgttattgggacacggcgataacgactcagcgcaccaaacaccacttact
gtagagcagatcttggtggtgacctttactgaggcggcaaccgcagagctcaaagatcgc
attcgtgcgcggatccaccaagcacgggtggcgtttagccgaggtcatagtgatgatcct
gtgatcaagccactgttagaacaaacggatgatcgcgatcgcgcctgtgaattgttactg
gctgccgagcggcagatggatgaagccgcagtttataccattcatggattttgccagcgc
atgctgacacaaaatgcgttcgagtcgggtagccgcttcaaaagccaatttattaaagat
gaaacccagctaaaagaacaagtggtggccgattattggcgtcgccatttctatggtatg
agcgccagcatggtgtcagagatccgcagtcactggaaaacaccgcaagccctgtacgcg
gatctgaataattttatcagtggtaatgaggtctacattcactcagaggttgaaaaggga
gacctagaaaccctgtatgctgagcgtattgccgttcttgccgagctccagaagcaatgg
tcagcagacagcgctgactttgaaaagttgattatggaatctgggatcaccaaaaatccc
tacaacaagaagaacgtaccgaactggataggacagattgatagttgggcagcaaaacca
ctcaccagtattgctgtgcctgagtgcttggagcgctttagctccagcacgctgcaagcc
aagactaaacctgacaagcaagcgccagagcatgtggtatttgatcatattgatgaatac
tgctcattgcctgctcttgaggtgaagcaggctatcctaagcaatgccattcccgaatgt
cgtgccgagttgcaaaaatcaaagggacagcagcagaaattgtcctttgatgatctgcta
agccagctcgactatgccttgcaagcggacgatgaagggctgttgtccgagcgtattcgc
gggctatatcccgttgcgatgattgatgagtttcaagatacggatcctcagcaatacaac
atttttagacatctctacctgcagcatcctgagtgtggattgttcatgattggtgaccct
aagcaggccatctatgcctttcgcggcgccgatatttttacctatatccgcgcacgtaaa
gaggtgacctcgcactttaatctcaccaccaactggcgctccagcaaagatatggtagag
gcgagtaacgcgctgtttcaagaggctgaatctgcgtttatttatgatgatgacatccct
tttactgccgtctctgcaagcccgggagcggatcaaaagtcgtggtcgctcaatggtgaa
actcaatcagccatgacggtttggctgaaggagaacgagggcgaagcggtagcaaagggc
gattataaccaaagcatggcgcagtccaccgccacgcaaatacagcgcctgttaagcgca
tccgatactggcaatgcactgctgcatggctccaaagatgagcgaattcaagcgggcaat
atagcagtgctggtgcggacagggcgcgaggcgaatttggttcgtagagcactgtcagag
aaaggcgttgctagtgtgtatctctccaacagagacagcgtttttgcaagcccagtggcc
agtgatgtgttgctatttctacgtgcagcattgcactttgataacgacagagcactgcgc
acagccgccgccagttccttgtttgacctttctctatttgatctagagcgcttgaatcaa
gatgaacaatactgggaactgctgagccaagagtttagtgattaccgacagttgtggctg
aaggccgggatcatgccgatgatccgtaagctaatccaatatagagagctagcccaaagg
ctacaaaatgagcatcagggggagcgaatacttaccgatctcatgcatctggctgagctg
ttgcaacaagcctcagcagagctagaaagtgatcatgctctgctgcgttggtttgaagag
cacatctttgaagcgggcagtggtgatgctggagacgaacagaagcagcgcttggagtcg
gaaaagaacttggttcaggtggtgaccatccacaaatccaaaggcttggaatacgacatt
atttttgttccctttgtcagtgcttttagaaaaagtgacaaggcactgtattacgacgct
gagcagcatcgcacgcgatttgatctggataataatagcgagggtattgcgctttcagat
aaagagaggcttgccgaggatttgcgtcttatctatgttgcggtcactcgtgcggtctat
ggttgctatctcggcgttgcgccgctaaaggaaggtcgtagtaaaaaagccagcgcacac
ctgagtgcgattggttatttgttgcagggtgcagaagcgcaagaagcctcagcgctctct
agtgctctgcatgtgttagaaaacagctatccatcaatacaggtttgtgaaccgcttgcc
tgggatgacgttcgctatcaagccccacacgttgagcagtccctgttacaagctagtaag
atgcaacaacagatagattggcgctggagaatgaccagttactcggggctggtgaaacaa
gggcatggctcaagccacaaagacgagagtgtttggttggatacaagcttagatattgat
gcctctgatgatcaaacgccactgcttgatttgaacaaaaagaccatgttcaacttcccg
cgcggtgcgagacccggcaccttcttgcataccctgtttgaagaggttgaatatacagag
tcagcctttaccgcagacaatgaagagatcatcaagcagcttctgatcaaagagcagcta
gatgaagaatggctgccagtactgcaacagatgatcgataaggtgctcaataccgaccta
gatggcagtggaatcaaactatcggaaaaacagccacagcaacgactagtagagatggag
tttcttcttcccatcgaaatcttgtccgctcagcggtttaatgccatcacccataagcat
gactctttaactgcgcaagccggagatttgggctttgctcctgtagagggaatgttgaaa
gggttcatcgatttagtgtttgagcatcaagggaaatactatgtactggactggaaatcc
aatcaccttggagacaacgcagaagactatcatcagaaaagcctcgatgaggcgatgatc
ggtcatcgctatgatgcgcagtatcaagtctatgccttagccctacaccgattcttaaaa
agccgactacaagactactcatacgagactcattttggtgggtgtttttatctattcttg
cgcggtatggatggcagcggtgactatggtgtctttcatgccaagccatcgcaacaaatg
ctagaggaactggatgcacatattcgtggcgaggaggctatctaa

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