Vibrio breoganii: A6E01_03560
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Entry
A6E01_03560 CDS
T04649
Name
(GenBank) helix-turn-helix transcriptional regulator
KO
K20918
LuxR family transcriptional regulator, positive regulator of biofilm formation
Organism
vbr
Vibrio breoganii
Pathway
vbr05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vbr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
A6E01_03560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vbr03000
]
A6E01_03560
Transcription factors [BR:
vbr03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
A6E01_03560
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GerE
Sigma70_r4_2
VpsT-like_REC
HTH_24
HTH_23
HTH_40
Sigma70_r4
HTH_11
Trans_reg_C
HTH_7
HTH_38
Mga
HTH_AsnC-type
HTH_VMAP-M9
Motif
Other DBs
NCBI-ProteinID:
ANO32330
UniProt:
A0AAN1CRB6
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All DBs
Position
1:739627..740268
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AA seq
213 aa
AA seq
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MNTRTLLILAEKNLQTSLLEKQLSANTALNVHTCLPEEAITNSQTLVTDLVLIEHSYLRD
IDNKQLLPDFDMLSWPLMVHNVPATPLDEELLRWKLLKGVLLKNAMVEHINESIEYIFNG
GLWLPRPYMERLVSSYRCSDLSSDPHDSDLTSREKQILELLAYGISNQQIATRLFLSEST
VKSHIYKLYKKLNVHSRHDAIKYARMNDYSLTK
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgaacactcgaactttgttgatccttgcggagaaaaatctgcaaactagtcttctagaa
aagcagctttccgccaatacagccctgaatgtacatacttgcctgcctgaagaagccatt
accaacagccaaactctcgtaactgacttagttttgatagagcacagttacttgcgtgat
atcgacaacaaacaacttttacccgactttgatatgttaagttggcctcttatggtgcac
aacgttcctgccacaccactggatgaagaacttctacgttggaagttgttaaaaggagta
cttcttaaaaatgcgatggttgagcacataaacgaaagcattgaatacatcttcaatgga
ggcctctggctacctagaccctatatggagcgattagtatcgagctatcgttgctctgat
ctatcttccgatccacacgattcggatttaacctctagagaaaagcaaatattagagcta
ttggcttatggcatctcgaaccagcaaatagcgacgcgattgtttctctcggagagcaca
gtaaaaagtcacatctacaagctgtataaaaagttaaatgttcattcgcgccatgatgca
attaagtatgcacgtatgaatgactactcgctgacgaaatag
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