Vibrio breoganii: A6E01_06320
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Entry
A6E01_06320 CDS
T04649
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
vbr
Vibrio breoganii
Brite
KEGG Orthology (KO) [BR:
vbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vbr03400
]
A6E01_06320
DNA repair and recombination proteins [BR:
vbr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A6E01_06320
Archaeal homologous recombinant proteins
A6E01_06320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
ANO32837
UniProt:
A0AAN0XUR4
LinkDB
All DBs
Position
1:1342787..1344013
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AA seq
408 aa
AA seq
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MKILHTSDWHLGQNFFTKSRLAEHQQFIQWLLGTVESEQVDCVIIAGDVFDTGTPPSYAR
ELYNRFVVDMHRLGCQLIVLGGNHDSVAMLNESKQLLKQLHTQVIASVGTEISEQILEIT
KSSGDVGAIVCAVPFIRPRDVLKSVSGESGSEKQKALGEAIKAHYSTLYQNALQLRSSKE
LDVPILATGHLTALGVTTSESVRDIYIGTLDGFAADGFPPADYIALGHIHRPQKVAKSDH
IRYSGSPIYLSFDELKSQKQVVLVEFASSHLVGIEPVAIPSFQPMFSLKGDLASLQHQLD
SISVEEGASVWVSIEVEVQDYLTDLQQAVQKMIGDREIEVLQLRRSRSHRERTLNQEQAE
TLSELSPIEVFSKRLAVEVFDSEEDKARQQRITTRFKQIVEDVEGERS
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatactgcacacctctgactggcatttgggccagaatttttttactaaaagccgc
ttagctgaacatcagcagtttattcagtggcttttaggcaccgtcgagtccgaacaggtc
gactgcgtcatcatcgccggtgacgtgtttgatactggtacgcctccaagctacgcacgt
gagttgtacaatcgctttgttgtggatatgcacagattagggtgccagcttatcgttctt
ggtggcaaccacgattcagtcgctatgctcaatgagtcaaaacagcttcttaagcagctt
catactcaggtgatagcgagcgtaggtacagagatctcagagcaaatactagagataact
aagagtagcggggatgttggcgctatcgtatgcgccgttcctttcattaggccaagagat
gtgcttaagagcgtgtctggagaatcgggaagtgaaaaacaaaaagcgcttggcgaggcg
ataaaagcccattactcaactctttatcaaaacgctttgcagctgcgttcaagtaaagag
ttagatgtgcctatccttgcgacagggcacttaaccgcgcttggggtcactacctcagag
tcagttcgagatatctatattggcacgttagacggctttgccgctgatggcttcccgcca
gcagattacattgcccttgggcatattcaccgcccgcaaaaggtcgctaaaagtgatcat
attcgttatagcggctcacctatctatctgagttttgatgagctgaaatcccagaaacaa
gtggtgttggtggagtttgcatcaagccatcttgtgggtatagagcccgttgctatccct
tcatttcagccgatgttttctttaaagggcgatttagctagcttgcagcatcaactggat
agcatcagcgttgaagaaggggcatctgtgtgggtgtctattgaagttgaggttcaagac
tacctaacggatcttcagcaagcggtacaaaagatgattggtgacagagagattgaagtg
ttacaactgcgccgctctagatcgcacagagaacgcacgttaaatcaggagcaagccgaa
accttgtcagaacttagcccaatagaggtgtttagtaagcgattagctgttgaggtcttt
gacagcgaagaagacaaagcccgacagcagagaataactacgcgctttaagcagattgtc
gaagatgttgaaggggagaggtcataa
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