Vibrio breoganii: A6E01_07830
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Entry
A6E01_07830 CDS
T04649
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
vbr
Vibrio breoganii
Pathway
vbr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vbr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A6E01_07830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vbr03019
]
A6E01_07830
03400 DNA repair and recombination proteins [BR:
vbr03400
]
A6E01_07830
Enzymes [BR:
vbr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A6E01_07830
Messenger RNA biogenesis [BR:
vbr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A6E01_07830
DNA repair and recombination proteins [BR:
vbr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
A6E01_07830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
HTH_40
ResIII
Motif
Other DBs
NCBI-ProteinID:
ANO33124
UniProt:
A0AAN1CSB2
LinkDB
All DBs
Position
1:complement(1695220..1697382)
Genome browser
AA seq
720 aa
AA seq
DB search
MSQFEHATKPQPIDVLNSVFGYDSFRHQQQAIVESVVHGQDVLTLMPTGGGKSICYQIPA
MVRSGVGVVVSPLIALMKDQVDALRQVGVACAFLNSTQDQYEQLEVEASVMRGEIQLLYV
SPERLLMERTLNLLEQSSLSLFAIDEAHCVSQWGHDFRPEYQKLSILPQRFPNVPRIALT
ATADERTKQEIIAQLHLSDAKVFVHSFDRPNIRYHVSEKANAKHELWDFIENNHAQDAGV
IYCLSRKKVEETAAWLADQGRVALPYHAGMSVEQKNQNQQRFLREDGVIIVATIAFGMGI
DKPDVRFVAHLSLPKSIESYYQETGRAGRDGLPANAWMAYGLQDLVMQKQMVENSDGNQE
YKQVQVGKLNSLLGYCELSACRRQTLLGYFGESLEQACGNCDNCLNPPKTWDGTQAAQKA
LSTVYRSGQRFGVTHLVNVLLGKSDDKIQRFGHDTLSTFGIGTELTAEQWKGVFRQLIAM
NYLTVEGMYNNLRLTEQCRAVLKGEQSIELRELRKAKKKKSSGVKKSSALSAQDAEVFEK
LRELRASLAKEQNVPAYVICHDASLADIALKRPTTLDTLGEISGFGEAKVAKYGEPIITL
MNQQPKQLPTLSATEQTTLELFQSLNDAELVAKERAIALNTVMSHLASAIELGACQLQQV
IDIEPFELEEFDAAIKQLNSLTEAKLKPLFEHFDAKYDYGTLRCVVGHFAYQQQLATLAS
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
ttgagtcagttcgagcacgccactaaaccccagcctatagatgtactaaattctgttttt
ggttacgacagctttcgtcaccaacaacaagccatagtcgagagcgtggtgcacggacaa
gatgttctgaccctgatgcctactggtggcggtaaatctatctgttaccagatcccagca
atggtgcgttcgggtgtcggtgtggtggtatcgccactgattgccttgatgaaagatcaa
gtggacgccctaagacaagtgggcgtggcgtgtgcctttttaaactccactcaagatcaa
tatgagcagcttgaagtcgaagcttcggtaatgcgcggcgagatacaactgctttatgtt
tctccagagcgcctgcttatggagcgcactcttaaccttcttgagcaatcgagcctgtcg
ttatttgccattgatgaagcacactgtgtaagccagtggggacacgattttcgacctgaa
taccaaaagctgtccatcttaccgcagcgctttcccaatgtgcctcgtatcgccttaacc
gcaacggccgatgagcgtacaaaacaagaaattatcgcacagctgcatctctctgatgcc
aaggtattcgtgcatagttttgaccgtcctaatatccgttatcatgtcagcgaaaaagcc
aatgcgaagcatgagctatgggactttattgagaacaaccatgcccaagatgcgggagtc
atttactgcctatcacgcaaaaaggtcgaggaaactgcagcctggcttgctgatcagggg
cgagtggctttgccttatcatgcgggcatgtctgtcgagcaaaagaatcaaaaccaacag
cgcttcttacgagaagacggcgtcatcattgtggcgaccattgcatttggtatgggtata
gataagcccgatgtacgatttgtcgcgcaccttagcctgccaaaaagtatcgagtcttac
taccaagaaactgggcgtgcagggcgtgatggattgccggcaaatgcgtggatggcttac
ggtttacaagaccttgttatgcaaaagcagatggtggaaaactctgatggcaatcaagaa
tacaagcaagtgcaggtgggcaagctcaattcattgcttggatattgcgagctgagtgct
tgtcgccgtcaaaccttgttaggttactttggtgagtcactagagcaggcgtgtggcaat
tgcgacaattgcttaaacccgcctaaaacatgggacggtactcaggcggcgcaaaaggcg
ctttctactgtgtatcgctcaggccagcgctttggtgtgacgcacctagtgaatgtgcta
cttggtaaaagtgatgacaagatccagcgctttggtcacgacaccctatctacctttggt
attggcactgagcttaccgctgagcagtggaagggggtatttagacagctcattgcaatg
aattacctgactgttgagggtatgtataacaatctaaggctgaccgagcaatgccgcgct
gtgcttaagggtgagcaaagtatagagctgcgtgagcttcgtaaggctaagaagaaaaaa
tccagcggtgtgaaaaaaagcagtgcgctttcagctcaagatgccgaggtgtttgagaag
ctaagagagcttcgtgcaagtctggccaaggaacaaaacgtcccggcctatgtgatttgt
cacgatgccagcttggctgatattgccctaaagagacccactacattagacacgctaggt
gaaatatccggttttggtgaagctaaggtcgctaagtatggcgagccgattatcacactg
atgaatcagcagcctaaacagctccctacattaagcgccacagagcaaaccacccttgag
ttatttcaatcgttgaacgatgccgaattggtggctaaagagcgcgcaattgcactcaac
accgtgatgagtcatctagcatcagccatagagcttggggcttgccaactgcaacaagtg
attgatattgaacccttcgaactagaagagtttgacgctgccattaagcagctcaatagt
ctcactgaggcaaagctaaagccgctgtttgagcactttgacgccaaatacgattacggc
actttgcgctgtgtcgtcggccactttgcttaccagcagcagctggctacgctagcgagt
tag
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