Vibrio breoganii: A6E01_09080
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Entry
A6E01_09080 CDS
T04649
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
vbr
Vibrio breoganii
Brite
KEGG Orthology (KO) [BR:
vbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vbr03016
]
A6E01_09080
Enzymes [BR:
vbr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
A6E01_09080
Transfer RNA biogenesis [BR:
vbr03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
A6E01_09080
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Herpes_UL51
SCHIP-1_C
Motif
Other DBs
NCBI-ProteinID:
ANO33356
UniProt:
A0AAN0XVI3
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All DBs
Position
1:complement(1967318..1968436)
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AA seq
372 aa
AA seq
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MNYQIVTDTQTLAQACEQARQKEAVMLDTEFVRTRTFFPQLGLVQMYDGELLSLIDTTVI
DDVTPIVELLQDTSVLKVLHACGEDIEVFQHHFQSVPTPMVDTQVMAAFLGHGLSTGFAT
LVNEYLSVALDKSEARTDWLARPLTPKQLDYAAADVFYLQPLFDKLQAALKESGYWQNAM
QESELQVAKRIRHHEPEKAYLDIKGAWQLSPQQLSVLKPLATWRYETALRKDLALNFVFK
EVDLLAVARFSLTSARDMEREQCDVRSVRRYSAVIANIVRKAQSTPEAEWPQKIDRLVDL
PNYKQTFKSLKDEVNKVVKDSHLAPEFLASKKQVNQLISWVWRKNMAPESTPDLMQGWRK
PLLGERLLKKLN
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
ttgaattatcagatagtgacagacactcaaactctggcacaggcgtgcgaacaagcccgt
caaaaagaagcggtgatgttggataccgaatttgtccgtacccgtacttttttcccgcag
cttggcttggtgcagatgtacgatggcgagcttcttagcttgatagataccaccgttatt
gatgatgtcactccgatagtagagctgctgcaagatacctctgtgcttaaggtgttgcat
gcgtgtggtgaagatattgaagtcttccaacaccatttccagagtgtcccaacgcctatg
gttgatacgcaggtaatggcggcatttttaggccacggcctttcgacaggctttgccact
ttggtaaatgaatacttgtcagtagcgctggataaaagcgaagcgcgtacagattggcta
gctcgtccattgaccccaaagcaattagattatgcggcggcggatgtattctatctgcaa
cctctatttgacaagctgcaagcggctcttaaggagtcgggttactggcagaatgcgatg
caagagtctgaacttcaggtggctaagcgtattcgtcatcatgagccagagaaagcgtat
ctcgacattaagggcgcatggcaattgtctccgcagcagcttagcgttcttaagccgttg
gcaacatggcgttatgaaacggcactgcgtaaagacttggcacttaactttgtgtttaaa
gaagtcgatttgctggctgttgctcgctttagtctcacctcagcacgtgatatggaaaga
gagcagtgtgatgtacgctcggtacgtcgttatagcgctgtgattgccaatattgtgcgt
aaagcgcaaagcacaccagaagccgagtggccgcaaaagattgatcgcctagtggatctg
ccaaactacaagcagacgttcaagtcactgaaagacgaagtgaacaaggtggtgaaggac
tcgcatcttgcccctgaatttttagcctctaagaagcaagtgaaccaacttatctcttgg
gtatggcgcaagaacatggcaccagagtccacccctgatttaatgcagggctggcgtaaa
cctctgcttggtgagcgtttactcaagaaattgaattaa
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