Vibrio breoganii: A6E01_09650
Help
Entry
A6E01_09650 CDS
T04649
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
vbr
Vibrio breoganii
Pathway
vbr03030
DNA replication
vbr03430
Mismatch repair
vbr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vbr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A6E01_09650
03430 Mismatch repair
A6E01_09650
03440 Homologous recombination
A6E01_09650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vbr03032
]
A6E01_09650
03400 DNA repair and recombination proteins [BR:
vbr03400
]
A6E01_09650
Enzymes [BR:
vbr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
A6E01_09650
DNA replication proteins [BR:
vbr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
A6E01_09650
DNA repair and recombination proteins [BR:
vbr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
A6E01_09650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
ANO33467
UniProt:
A0AAN0XVW2
LinkDB
All DBs
Position
1:complement(2090385..2093864)
Genome browser
AA seq
1159 aa
AA seq
DB search
MTEPRFIHLRVHSDYSMVDGLSKVPPLVKKVAEIGMPAMALTDFTNLCGLVKFYNTAHGS
GVKPIIGADFTMQSDEFGDELTRLTVLAANNQGYKNLTLLISKAYLRGHVQHQPVIDKAW
LAELNEGLIVLSGGKSGEVGKALLKGNHDLAAQCVGFYQQHFPDRFYLELTRTGRVDEES
YLHFALECAEQTQLPVVATNEVVFVNQDQFDAHEIRVAIHDGYTLEDPRRPKNYSAQQYL
RTEEEMCELFSDIPEALQNSVEIAKRCNVTVRLGEYFLPNFPTGDLTIEDFLVHKSQEGL
EERLEFLFPDPAIRQQKRPEYDERLQIELEVVNQMGFPGYFLIVMEFIQWSKDNDIPVGP
GRGSGAGSLVAYALKITDLDPLEYDLLFERFLNPERVSMPDFDIDFCMDKRDQVIDHVAE
LYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLAKAFDAEPQ
MGELYEADEEVKDLIDMCRILEGCTRNAGKHAGGVVISPTTITDFAPIYADAEGQFPVTQ
FDKNDVETAGLVKFDFLGLRTLTIIDWALGLVNPRLEKSGQQPIRIESIPLDDPASFRLL
QNSETTAVFQLESRGMKDLIKRLQPDCFEDIIALVALFRPGPLQSGMVDNFIDRKHGREA
ISYPDETWQHESLKETLDPTYGIILYQEQVMQIAQILSGYTLGGADMLRRAMGKKKPEEM
EKQRSIFKEGAENNGVDGELSMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKTHYPA
EFMAAVMTADMDNTEKVVGLVDECLRMGLKLLPPDVNSGLYRFNVDDTGAIVYGIGAIKG
VGEGPIESIIEARNKDGHFKDLFDFCARIDLKKCNKRVIEKLIQAGALDRLGPHRAAMMA
SVDAAVKAAGQYHQAEAFGQSDMFGVLTDTHSDVEQAYAQVPEWPEKVWLEGERETLGLY
LTGHPINLYLRELAKYTSCRLNNATPTRRDQSVTLAGLVIAAKVMTTKRGTRIGILSLDD
RSGRMEVMLFSDVLEKYAELVEKDRIVVVSGQVSFDDFNGGLKMTAREVMDLGHAREKYA
SGLSISISESQIDAQFFERFSRVLEPHRAGTIPVNIYYQRSDARAKLSLGVEWRVTPTDT
LIDDLKQLLGNDQVELEFN
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgacagagcctaggtttatacatttacgcgtccacagcgactattccatggtggatggc
ttgtctaaagtgccacctttggtaaaaaaggtagctgagataggcatgccagcaatggcg
cttaccgatttcactaacctttgtggtttggtgaaattctataacaccgctcacggctct
ggtgttaagcccattattggtgctgacttcacaatgcaatcggacgagtttggtgatgaa
ctgactcgtctaacggttcttgctgccaacaatcaaggctataaaaacctgaccctgttg
atctcaaaggcttaccttagaggacacgttcagcatcagcccgtcattgataaagcgtgg
cttgctgagctaaatgaaggcttaatcgtcctttctggtggtaagagtggcgaagtaggt
aaagccttgctcaaaggcaatcatgaccttgctgcacaatgcgttgggttttatcagcaa
cattttccagatcgattttatctagaattgacgcgaacaggtcgcgttgatgaggagagc
tatctccactttgcgcttgaatgtgccgagcaaactcagttgcctgtcgtggcaaccaat
gaagtggtctttgttaaccaagaccagtttgatgcccatgaaatacgtgtcgctatccat
gacggttacaccctagaagaccctcgtcgccctaaaaattacagtgctcagcaatacctg
cgtactgaagaagagatgtgtgagctcttctctgatatcccagaagcgttgcagaacagt
gtcgagatcgctaagcgctgtaatgttaccgtgcgccttggagagtatttccttccgaac
ttcccaacgggtgatttgaccattgaagacttcttggtacacaaatcccaagaaggcctt
gaagagcgtctagagtttctattccctgatcctgctattaggcaacaaaagcgtccggaa
tatgatgagcgcttgcagattgagcttgaagttgtcaaccagatgggcttccctggttat
ttcttgatcgtaatggagtttatccagtggtctaaggataacgacattccggtgggccca
ggacgtggttcaggtgctggctcactggtggcttacgcactcaagatcaccgaccttgac
ccgctagaatatgacctgctgtttgagcgattcttgaaccctgagcgtgtctctatgccc
gatttcgatatcgacttctgcatggataagcgtgatcaggttattgaccacgtagcggag
ctctatgggcgtgatgcggtttcgcagatcattacttttggtaccatggcggcaaaagcg
gttatccgcgatgtaggccgtgtattgggtcacccatacggctttgtcgaccgaatttcc
aagctagtaccaccagatcctggtatgactctggcgaaagcatttgatgctgagccgcag
atgggtgaattgtacgaagcggatgaagaggttaaagaccttatcgatatgtgtcgcatc
ctagagggctgtacacgtaacgccggtaagcacgccggtggtgtggttatctctccaact
acgattaccgattttgcacctatctacgcggatgccgagggacaattccctgttactcag
tttgataagaacgatgtagaaactgcaggcttggtcaaatttgacttcttaggcttgcgt
acgctcaccatcatcgactgggctttggggttagtgaatcctcgcttggaaaaaagcggc
caacaacccattcgcatcgaatccattccactagatgatccggcttcgtttaggctactg
cagaactccgaaactacggcagtattccagttagaatcccgaggtatgaaagaccttatc
aagcgtcttcagccggactgtttcgaagatattattgcattggtagccctgttccgccca
ggcccgctgcaatcgggtatggtagataactttatcgaccgtaagcacggtcgtgaggcc
atctcttaccctgatgaaacttggcaacatgagtcactaaaagagacgctagacccaacc
tacggcatcattctctatcaagagcaggtcatgcagatcgctcagatcttgtcaggctat
acgctaggtggagccgatatgcttcgccgtgctatgggtaagaaaaagcctgaggagatg
gaaaagcaacgctccatctttaaagagggcgctgagaacaacggcgtcgatggcgagttg
tcgatgaagatcttcgacttggtagaaaagtttgcaggctacggttttaacaaatcgcac
tcagcggcttatgctttggtttcttatcagactctatggctgaagacccactatccagca
gaattcatggcggcggtaatgactgctgatatggacaacaccgaaaaggttgttggactg
gtggatgaatgtcttcgcatggggctgaaactgcttccgccagatgtgaactcaggcctt
tatcgcttcaatgtcgatgatactggcgcaattgtgtatggtataggcgctatcaaaggc
gtgggcgaaggccctattgagagtatcatcgaagctcgaaacaaagatgggcactttaaa
gacctgttcgacttttgtgcccgcatcgatcttaaaaagtgtaataaacgcgttattgaa
aagctgatacaagccggtgcacttgaccgcttaggcccgcacagagccgctatgatggct
tcggtggatgccgcagtgaaagccgcaggccaataccatcaggctgaggcctttggtcag
agcgacatgtttggcgtattaactgatactcactcagatgtagagcaggcgtacgctcaa
gttcctgagtggccagagaaagtatggttagaaggggagcgcgaaacccttggtttgtac
ctaacgggccacccaattaatctgtatcttcgtgaactggctaaatacaccagttgtcga
ttgaacaatgcgactcctacaagacgagaccaatcggtgaccttagcaggtcttgttatt
gcggctaaagtgatgacgactaagcgaggaacacgtatcggtattctttctcttgatgac
cgttctggccgaatggaggtgatgcttttctcagatgtgttagaaaagtatgcagaattg
gtagaaaaagatagaattgtagtggtttctggacaggtcagctttgatgatttcaatggt
ggccttaaaatgacggcgcgcgaggttatggatcttggccatgcccgtgaaaaatacgcc
tcaggactcagtatttcgatctctgagtctcaaatcgatgcccagttctttgaacgcttt
agtcgagtgttggaaccgcatcgcgctggtactatcccagtcaatatttattatcaacgt
agcgacgcaagagctaagctctctttgggagtggaatggcgagtgacgccaaccgatacg
ctgatagacgatttaaagcagttgcttggtaatgaccaagtggaactcgaatttaactga
DBGET
integrated database retrieval system
