Vibrio breoganii: A6E01_10540
Help
Entry
A6E01_10540 CDS
T04649
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
vbr
Vibrio breoganii
Brite
KEGG Orthology (KO) [BR:
vbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vbr03019
]
A6E01_10540
Enzymes [BR:
vbr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
A6E01_10540
Messenger RNA biogenesis [BR:
vbr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
A6E01_10540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
CON_HrpB
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ANO33641
UniProt:
A0AAN0XW12
LinkDB
All DBs
Position
1:complement(2296203..2298695)
Genome browser
AA seq
830 aa
AA seq
DB search
MAQALLLTQALSNLPIGAILEDITASLTLNSQLIIQAPPGAGKSTFLPLQLLLDPQWQGK
IIMLEPRRLAAKSIATFIAKQLGEPVGRRVGYRIRGESKTSASTRLEIVTEGVLTRMIQS
DPELSDVELLLFDEFHERSIHADLGLALALEVQQVFNEQLKIIVMSATLDQAGLHSIMPD
AVIHTSQGRGYPIEQRYAPLKPNQNLIAHICQQSIKAINEEAGSILVFLPSVGLINACLE
SLSNELSQVNGVKVLPLHGGLDFAAQQQAIQPCNKGERKVVLTTNIAETSLTIEGVRIVI
DSGLENRASFDLSSGITRLEQKWISQSSAIQRAGRAGRTEPGICVRLFSESQFNQNPSHT
TPEILRSDLAPLMLEAVQWGSSDLTALQCVDQPSPAAISAASDLLQRLTLLTSDLTLTQQ
GRRTLQLGVEPRLGAMLSRAPDALFDTALVTAAVLEEPMRNSDDIAFQVALFAQRKHPKQ
GVLKRRVESLAARCHRKFSVASIQTDQVGVCLSFAYPDRLGQRRSLSGNQYQLASGHGAF
VDENSRLSSDEYLAVANLQKGRQSASRILAAASISLSELETYHRLEEEDVVQWSDEKQAM
LAEHQARIGQLVIKRKPISPSEIPPQVLAKGLLDYIVKKGLQILPWSKDSEALRSRVNCA
MAWLPEKEWPDWSEQGLLNNLESWLLPYLDNVRSVKALQRLNMLDILNAELGWPLNQEIN
TLLPKALKVPSGSTKTIHYSEGQNPKLSVKLQEMFGEPQSPTVAQGRVKVTLELLSPAQR
PLQVTQDLAGFWSGAYKEVQKEMKGRYPKHPWPDDPASHQATSKTKRHLK
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atggcacaggcccttctcttgactcaagcactatccaatttgcctattggcgcaatttta
gaggatattaccgcctctcttacgctcaattctcagttgattattcaagcgcctcctggc
gcgggtaaatcgacctttttgccattgcagttgctcctcgatccacaatggcagggcaag
atcattatgcttgagccaagaagactcgcggcgaagagtatcgccacctttattgcaaaa
cagcttggcgagcctgtcggtcggcgcgtgggttatcgaatccgcggcgagagtaaaacc
agtgcatctactcggcttgagatagtcacagagggtgtccttactcgcatgattcaatca
gaccctgagctcagtgacgttgaactgctgctatttgatgagtttcacgaaagaagtatc
catgcagatctcggtttagccctggcacttgaggtgcagcaagttttcaatgaacagctt
aagatcatcgtgatgtcagcaacgctcgaccaagctggtctgcattccattatgcctgat
gcggtgattcatacctcacaagggcgtggctatcctattgagcagcgatacgcccctctt
aagccaaatcaaaatctcatcgcgcatatttgtcagcaaagcatcaaagcgataaatgaa
gaggcaggctcgatacttgttttcttgcccagtgttgggctcatcaatgcttgcttggaa
tcgctgagcaacgagctatcacaggttaacggagtcaaggtacttcccttgcatggtggc
ttggattttgccgctcaacagcaggccatacagccatgcaataagggcgaaagaaaggtg
gtattaaccaccaatattgcagaaacctcgctgactattgagggggtaagaatcgtaata
gactcaggtttagagaatcgagcgagctttgacttgagtagcggtattactcgccttgag
cagaaatggatatcgcaatcatcggccatccaacgtgcaggacgtgcagggcgaacagag
ccagggatttgcgtaagactcttttctgaatctcaattcaatcaaaacccatcgcacacc
acgccagagatattacgctctgatttagcgcctcttatgcttgaagctgtacagtgggga
agtagcgatcttacggcgctgcaatgtgttgaccaaccatcacccgcggcgataagtgct
gcgagtgatttattgcaacgcctaaccttacttacttctgacttaaccctgactcagcaa
gggagacgaactctacaattaggtgtagaacctcgtttgggcgccatgctttcacgcgcg
cctgatgcgctttttgataccgccttggtgaccgcagcagtattggaagagccgatgaga
aatagtgatgatatcgcatttcaagtcgccctgtttgcacagaggaagcaccctaagcaa
ggcgtgctaaaaagaagagtagagagtttagcagcaaggtgtcatcgtaagttttcagtt
gcctcgatacagacagaccaggtaggcgtgtgtctaagttttgcttatcctgatcgtctc
gggcagcgtcgctctttaagcggtaatcagtaccaacttgcctccggtcatggcgcgttt
gtggatgagaatagtcgcttatcgagcgatgagtacttagcggttgccaacctgcagaag
gggcgtcagtcggccagtcgcatattagccgccgcaagtattagcttgtctgagctggag
acttaccaccgtcttgaagaagaggatgtggtgcaatggagcgatgaaaagcaggctatg
cttgccgagcatcaagctcgaatcggtcagttggtgatcaagcgtaaacctatttcaccc
tctgagataccgcctcaggtgttggcgaaaggactgctggattacattgttaaaaaaggc
ttgcagatactgccttggagcaaggactctgaggctctgagaagtcgcgttaactgcgca
atggcttggcttccggagaaagagtggccagattggagcgagcaagggctattaaataac
ctagagagctggttattaccctaccttgataatgttcgctcggtaaaagccctacagcgc
ttgaatatgctggatattcttaatgctgaattaggctggccattgaaccaagaaattaat
accttactgcctaaggctttaaaggtgccttctggttcgacaaaaacaattcactacagt
gaagggcaaaaccctaagctatcggtcaagcttcaagaaatgtttggtgagcctcagtcg
ccaacggtggcgcaaggtagagttaaagtgacacttgaattactctctcctgcgcaaagg
ccattacaggtcactcaagacctcgccggtttctggagtggagcgtacaaagaggtgcaa
aaagagatgaagggtcgctatcctaagcacccgtggccagatgaccctgcctcacaccaa
gccaccagtaaaacgaaacgtcatcttaagtaa
DBGET
integrated database retrieval system
