Vibrio breoganii: A6E01_10810
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Entry
A6E01_10810 CDS
T04649
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
vbr
Vibrio breoganii
Pathway
vbr05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vbr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
A6E01_10810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vbr03021
]
A6E01_10810
Transcription machinery [BR:
vbr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
A6E01_10810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
ANO33686
UniProt:
A0AAJ5JMR0
LinkDB
All DBs
Position
1:complement(2348746..2349720)
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AA seq
324 aa
AA seq
DB search
MSMDNTAAKVEDLTEDKVSAEVEESSIVEKIETQVKEEFDASTKNLDATQLYLGEIGFSP
LLTAEEEVLYARRALRGDEAARKRMIESNLRLVVKISRRYSNRGLALLDLIEEGNLGLIR
AVEKFDPERGFRFSTYATWWIRQTIERALMNQTRTIRLPIHVVKELNIYLRTARELSQKL
DHEPTAEEIAQQLDKPVDDVSKMLRLNERVSSVDTPIGGDGDKALLDIIPDINNSDPEVS
TQDDDIKHSLIDWLDELNPKQKEVLARRFGLLGYEPSTLEEVGREINLTRERVRQIQVEG
LRRLREILLKQGLNMESLFNFDSE
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgagtatggataacactgcagcaaaagtggaagacctaacagaagacaaagttagtgcg
gaagtagaagaaagtagcattgttgaaaagatagaaactcaggtaaaagaagagtttgat
gcctcaacaaagaatctagacgcaactcaactttatctaggcgaaatcggcttctcccca
ctactaacagcagaagaagaggttctatacgcaagacgagcacttcgcggagacgaagca
gcgcgcaagcgtatgattgaaagtaacctgcgtctggttgttaagatctcgcgtcgttac
agcaatcgtggcttagctctattagacctaattgaagaggggaaccttggtctaattcgc
gccgtagaaaaattcgatcctgaacgtggcttcaggttctcaacctacgcaacttggtgg
attcgacaaaccatcgaacgtgccttgatgaaccaaacccgcacaattcgcttgccgatc
cacgtggttaaagagctgaacatttatctgagaacggctcgtgagttatctcagaagctt
gaccatgaaccaacagccgaagagattgctcagcaactggataagccagtagatgatgtc
agcaaaatgctacgtcttaatgagcgtgtcagttcagtagatactccaattggtggtgac
ggtgataaggcattgcttgatatcattcctgacatcaacaactcagaccctgaagtgtcc
actcaagatgacgatattaagcactctcttatcgattggcttgatgagctgaatccaaaa
cagaaagaagtacttgctcgtcgctttggcttgcttggctatgaaccgtctacgttagaa
gaggtaggccgtgaaattaacctaactcgtgaacgcgtacgtcagatccaagttgagggt
ctccgtcgattgcgtgagattctattgaagcaaggactgaatatggagtcgctgtttaac
ttcgacagtgaataa
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