Vibrio breoganii: A6E01_11630
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Entry
A6E01_11630 CDS
T04649
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
vbr
Vibrio breoganii
Pathway
vbr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vbr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A6E01_11630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vbr03400
]
A6E01_11630
DNA repair and recombination proteins [BR:
vbr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A6E01_11630
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
A6E01_11630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_16
AAA_29
nSTAND1
DnaJ_CXXCXGXG
RsgA_GTPase
AAA_21
AAA_25
AAA_23
BCA_ABC_TP_C
NACHT
Viral_helicase1
ScfRs
Motif
Other DBs
NCBI-ProteinID:
ANO33830
UniProt:
A0AAN1CSS2
LinkDB
All DBs
Position
1:2509395..2512220
Genome browser
AA seq
941 aa
AA seq
DB search
MDTIDVRGARTHNLKNINLTIPRDKLTVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEVYDYLRLLYARVGEPRC
PEHKVPLSAQTISQMVDKVLEMPEGSKMMLMAPIVKERKGEHVKTFENLAAQGFIRARVD
GDICDLSDPPTLELHKKHTIEVIVDRFKVRSDLKQRLAESFETTLELSGGIAVVASMDKS
DDEEIIFSANFACPYCGYSMQELEPRLFSFNNPAGACHTCDGLGVQQYFDETRVVLDQNL
SIAEGAIKGWDQKNYYYFQMLSALADHYDFDLYVPFKSLSKRIREIILKGSGRTEVEFKY
INDRGDIRVKTHPFEGILNTLERRYRDTESNSVREDLAKYISTRSCASCNGTRLREEARN
VFVQDTPLPNIVEMSISEALEFFESMSLEGQKAQIAEKIMKEINDRLSFLVNVGLNYLNL
SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLTHLRDLGNT
VLVVEHDEDAIRTADHIIDIGPGAGVHGGNVVAEGTYEDIINNPESLTGQYLKGTKEIAI
PKKRTPVDKDKQLTLSGASGNNLKTVDLTIPCGLFTCVTGVSGSGKSTLINDTFFKIAHR
ELNGATTSNPSPYDSINGLEHFDKVIDIDQSPIGRTPRSNPATYTGIFTPIRELFAGTQE
SRSRGYKPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVPCDSCKGKRYNRETLEVKY
KGKSIDEVLNMTVEDAHTFFEPVPVIARKLKTLIDVGLSYIRLGQAATTLSGGEAQRVKL
ARELSKRDTGKTLYILDEPTTGLHFHDIQQLLTVLHRLRDHGNTVVVIEHNLDVIKTADW
IVDLGPEGGQGGGEIVATGTPEQVAKVKGSHTAHFLKPMLK
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggacactatcgacgttcgtggcgcccgaacccacaacttaaaaaacatcaacctcacc
attccaagagacaagctgacagtgattactggtctttctggatcaggtaagtcttcttta
gctttcgataccttatatgctgaagggcaacgtcgatatgtagagtctctatctgcttac
gcccgccaattcctgtcattgatggaaaagcccgatgtggaccacattgagggtctatca
cctgctatctcaattgaacagaaatcgacatcccataaccctcgttctaccgtgggtaca
attaccgaggtctatgattatcttcgtctattgtacgcgcgagtgggtgaaccgcgttgc
cctgaacacaaagtgccgctgtctgcacaaaccatcagccagatggtagataaggtctta
gagatgccagaaggttctaagatgatgctgatggctccgattgtaaaagagcgtaagggt
gagcatgttaaaacctttgagaacctagctgcacagggctttattcgagctcgcgtagat
ggcgacatctgcgatctttctgatccaccgactctagagctccataagaaacacaccatt
gaggttattgttgaccgatttaaggtacgtagcgatcttaagcagcgacttgccgaatct
tttgaaaccacactagagctatcaggcggtattgccgtagtggcttcaatggataaatcg
gacgatgaagagatcattttctctgctaactttgcctgcccatactgtggttacagcatg
caagagcttgagcctaggctcttctctttcaataaccccgcaggagcctgtcacacttgt
gacggccttggtgtacagcaatactttgatgagacgagagtcgttctagatcagaaccta
agtattgccgaaggagcaatcaaaggctgggatcaaaagaactactattactttcagatg
cttagcgctttagctgatcactatgatttcgatctatacgtgccctttaagtctctatca
aaaaggatccgtgagatcatattgaagggctcgggtcgaacagaggtcgagtttaagtac
attaatgatcgtggcgatattcgagttaagactcacccatttgaagggatccttaacacc
ctagagcgccgctatcgagacactgaatccaactcagtgcgtgaagatctggctaagtac
atctctactcgctcttgtgcaagttgtaacggaacccgccttcgagaagaagcacgaaat
gtctttgttcaagatactcctttacctaacatcgttgagatgagtattagtgaggcgttg
gagtttttcgaaagcatgagtcttgaggggcaaaaagcccagatcgccgaaaagatcatg
aaagagattaatgatcgtctgagcttcttggtcaatgttggcctcaactatttaaatctg
tctcgcagtgctgaaactctttctggtggtgaggcgcagcgtattcgtcttgccagccaa
atcggtgctgggctcgttggtgttatgtatgtgctcgatgagccctctattggattgcat
cagcgagacaatgaacgcctgcttggaactctgactcacctgcgagatctcggcaatacc
gtactcgtcgtagaacatgatgaagatgccatccgcactgcggatcatattattgatatt
ggccctggcgcaggggttcatggcggtaatgttgttgcagagggaacctatgaagatatc
atcaataaccctgagtctttaaccgggcagtacttaaagggcaccaaggaaatcgccatt
cccaaaaaacgtacccctgttgataaagataaacagctgacactcagtggcgcttcgggc
aacaacctcaaaacggtcgatcttaccatcccatgtggcttgtttacttgtgtaacgggc
gtatcagggtcaggtaagtcaacgcttattaacgacaccttctttaagatcgcgcaccgt
gagcttaacggagcaaccaccagcaaccctagcccttacgactccatcaatggcttagag
cactttgataaggtcatcgatatcgatcaaagcccaatcggacgtacgccaagatcaaac
ccagctacttacactggtatcttcacgccaatacgagagctatttgccggtacgcaagag
tcacgctctcgcggctataaaccgggtcgatttagctttaacgtgagaggcggtcgctgt
gaagcgtgtcagggtgatggcgttattaaggtagagatgcacttcctaccggatgtgtat
gtgccatgtgattcttgtaaaggcaagcgatacaaccgtgagaccctcgaggtgaaatac
aagggtaagtctatcgatgaagtattgaacatgaccgttgaagacgctcacaccttcttt
gaacccgtgcctgttattgcgcgcaaactaaagaccctgattgatgttggcctttcgtat
atccgcctaggccaagcggctaccaccctgtctggtggtgaggcccaacgcgttaagtta
gcgagagagctgtccaaacgcgatacaggtaaaacgctgtatattcttgatgagcctacc
actggccttcattttcatgatatacaacagttacttactgtattgcatcgccttcgcgat
cacggcaacaccgttgtagtgatagagcataaccttgatgtgattaaaactgcagactgg
atcgtcgatcttggacctgagggtggacaaggtggtggtgagattgtcgctaccggaaca
cctgagcaggttgctaaagtgaaaggctcgcataccgctcactttttaaagccgatgctt
aaatag
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