Vibrio breoganii: A6E01_12410
Help
Entry
A6E01_12410 CDS
T04649
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
vbr
Vibrio breoganii
Pathway
vbr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
vbr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
A6E01_12410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vbr03021
]
A6E01_12410
03400 DNA repair and recombination proteins [BR:
vbr03400
]
A6E01_12410
Enzymes [BR:
vbr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
A6E01_12410
Transcription machinery [BR:
vbr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
A6E01_12410
DNA repair and recombination proteins [BR:
vbr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
A6E01_12410
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
Motif
Other DBs
NCBI-ProteinID:
ANO33959
LinkDB
All DBs
Position
1:complement(2681334..2685362)
Genome browser
AA seq
1342 aa
AA seq
DB search
MVYSYTEKKRIRKDFGTRPQVLDVPYLLSIQLDSFDKFIEQDPEGQYGLEAAFRSVFPIQ
SYNGNSELQYVSYRLGEPVFDVKECQIRGITYSKPLRVKLRLVVFDRDAPAGTVKDIKEQ
EVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDSDKGKTHSSGKVLYNARVIPYR
GSWLDFEFDPKDSLFVRIDRRRKLPASIILRALGKTTEEILDLFFEKVRFEVQNQTLMME
LVPERLRGETASFDVEANGKTYVEAGRRVTARHIRSLEKDGVEFIEVPVDYIVGKVASKD
YIDESTGEIVVGANQEFSLESLANLAQAGHTKLEVLFTNDLDHGPFMSDTVRNDSTTDRI
SALVEIYRMMRPGEPPTKEAAEALFQSLFFSEERYDLSTVGRMKFNSSIMREDAGEQGIL
DETDIIEVMKKLISIRNGKGEVDDIDHLGNRRIRSVGEMAENQFRVGLVRVERAVKERLS
LGDLDAIMPQDLINAKPISAAVKEFFGSSQLSQFMDQNNPLSEVTHKRRISALGPGGLTR
ERAGFEVRDVHVTHYGRLCPIETPEGPNIGLINSLSAYARCNEYGFLETPYRRVVDGVVT
EEVDYLSAIEEGQYVIAQANTVLSEDNTFTEELITARLKGESGLHPRENVSYMDVATNQV
VSIAASLIPFLEHDDANRALMGANMQRQAVPTLRADKPLVGTGVERNIAVDSGVTAVAKR
GGSVQSVDASRIVVKVNENELVPGEAGIDIYNLTKYTRSNQNTCINQRPTVLPGEPVAKG
DVLADGPSTDLGELALGQNMRIAFMPWNGYNFEDSILVSERVVQEDRFTTIHIQELSCVA
RDTKLGSEEITADIPNVGEAALSKLDESGIVYIGAEVKGGDILVGKVTPKGETQLTPEEK
LLRAIFGEKASDVKDTSLRVPNSVSGTIIDVQVFTRDGVEKDKRALEIEQMQLKEAKKDL
TEEFQILEGGLLNRVRAVLIAGGYSEAKLDSINRKQWLEQTLEDDALQSQLEQLAEQNDE
LKADFDKKFETKRRKITQGDDLAPGVLKIVKVYLAVKRRIQPGDKMAGRHGNKGVISKIN
PVEDMPYDEKGQPVDIVLNPLGVPSRMNIGQILEVHLGLAAKGIGDKINQMVKEQQELAK
FREFLQKVYDLGDSRQEVDIAELSDDQVRTLIKNLRGGLPIATPVFDGASERNIKDLLKL
GDLPESGQLTLFDGRTGDSFERPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLGG
KAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGNHAMEPGMPE
SFNVLLKEIRSLGINIELEDEE
NT seq
4029 nt
NT seq
+upstream
nt +downstream
nt
atggtttactcttataccgagaaaaagcgcatccgtaaggattttggtactcgtccacaa
gttttggacgtcccgtacctgctatcgatccagcttgattctttcgataaatttatcgag
caggatcctgaaggacaatacggtctagaagctgcttttcgttctgtttttccaattcag
agctacaacggcaattctgagctgcaatacgttagctaccgtcttggtgaaccagtattt
gatgttaaagaatgtcaaattcgaggtatcacttattcaaaaccgctgcgcgttaagctg
cgtctagtcgtattcgacagagatgcaccagctggtactgtaaaagatattaaagaacaa
gaagtctacatgggtgaaattccactcatgacagacaatggtaccttcgtgatcaatggt
accgagagggttatcgtatcccagctgcacagaagcccaggtgtattcttcgacagcgat
aagggtaagactcactcttctggtaaagttttatataacgcacgtgttattccttaccgt
ggctcatggttagactttgagttcgatccaaaggatagcttgttcgttcgtatcgaccgt
cgtcgtaagcttccagcgtctattatcctacgtgcattgggtaaaacgacagaagagatc
ctagatctgttcttcgaaaaagtacgctttgaagttcaaaaccaaactctaatgatggag
ttggttcctgagcgtctgcgtggcgaaactgcttcatttgatgttgaagcaaacggcaag
acttacgttgaagctggccgtcgtgttacagctcgtcatatccgctctcttgaaaaagat
ggcgttgagttcattgaagtaccggttgactacatcgtaggcaaagtggcttcaaaagat
tacattgacgagagcactggcgaaatcgttgtgggcgcgaaccaagagttcagcctagag
agcctagcgaaccttgcgcaagcaggtcacactaagcttgaagttctgttcacgaatgac
ctagatcatggtccattcatgtcagacacagttcgcaacgacagcactacagaccgtatc
tctgcattggtagaaatctaccgcatgatgcgtcctggcgagccgccaacgaaagaagct
gctgaagctctgttccaaagcttgttcttctctgaagagcgctacgacctatcaactgta
ggccgtatgaagttcaacagctctatcatgcgtgaagacgctggtgagcaaggcatccta
gacgaaactgatatcatcgaagtgatgaagaagcttatctctatccgtaatggtaaaggt
gaagtggatgatatcgatcaccttggtaaccgtcgtattcgctctgtgggcgaaatggct
gaaaaccaattccgtgtaggtctagttcgtgttgagcgtgctgttaaagagcgtttgagc
cttggtgaccttgatgcaatcatgcctcaagatctgatcaacgctaagccaatttctgcg
gcagtgaaagagttctttggctcttctcagttgtctcagtttatggatcagaacaacccg
ctttcagaagttactcacaagcgtcgtatctctgcgttaggtcctggtggtctaactcgt
gagcgtgctggctttgaggttcgtgacgttcacgttacgcactacggtcgtctatgtccg
atcgaaactcctgaaggtccaaacatcggtctaattaactcactatctgcttacgcacgt
tgtaatgagtatggtttcctagaaaccccataccgtcgcgttgttgatggtgtagtaacc
gaagaagttgattacctatctgctatcgaagaaggtcaatacgttatcgctcaggcgaac
accgtactgtctgaagacaacacctttacagaagaactgatcacagcccgcttgaagggt
gaatcaggtctgcacccacgtgaaaacgtgagctatatggatgttgctacgaaccaggta
gtatctatcgctgcatctttgatcccattcctagagcacgatgatgcaaaccgtgcattg
atgggtgcaaacatgcaacgtcaggcagttccaactctacgtgctgataagccacttgta
ggtactggtgttgagcgcaacattgcggttgactctggtgttacagcggtagctaagcgc
ggcggttcggttcagtctgtagacgcatctcgcatcgtagttaaggttaacgaaaatgaa
ttggtaccaggcgaagccggtatcgacatttacaacctaactaaatacacgcgttctaac
cagaacacttgtattaaccaacgtcctaccgtgctacctggcgaaccagtagcaaaaggt
gacgttctagcagatggtccttctaccgaccttggtgaactggctcttggtcagaacatg
cgtatcgcatttatgccttggaacggttacaactttgaggattcaatcctagtttctgag
cgtgtagtacaagaagatcgctttactactatccacatccaagaactatcttgtgtggct
cgtgatactaagctgggttctgaagagatcactgctgatattccaaacgtaggtgaagct
gctctatctaaactagatgagtcaggtatcgtttacattggtgctgaagttaagggtggc
gacatcctagttggtaaggtaactccgaaaggcgaaactcagctaactcctgaagagaaa
ctactacgtgcaatcttcggtgaaaaagcatctgacgttaaagatacttcactgcgtgta
cctaactctgtttcaggtaccatcattgacgttcaagtcttcactcgcgatggcgtagag
aaagacaagcgtgctctagaaattgagcaaatgcagctgaaagaagcgaagaaagatcta
actgaagaattccagattcttgagggtggccttcttaaccgtgttcgcgctgtattgatc
gctggtggttactcggaagcgaaacttgacagcattaaccgcaaacagtggttagagcag
actcttgaagatgacgcactgcaatctcaacttgagcaacttgcagagcagaacgacgag
cttaaagctgacttcgataagaagttcgaaactaagcgtcgtaagatcactcaaggcgat
gacctagcacctggcgttcttaagattgttaaggtttacctagcggttaaacgtcgcatc
cagcctggtgataaaatggcgggtcgtcacggtaacaagggtgttatctctaagattaac
cctgttgaagacatgccttacgatgagaaaggtcaaccggtcgatatcgttcttaaccca
ctgggtgtaccttcgcgtatgaacatcggtcagatcctagaagtacacttgggtctagct
gctaaaggtattggtgacaagatcaaccagatggttaaagaacagcaggagcttgctaag
ttccgtgagttcttacagaaggtttatgatctaggtgactctcgtcaagaagtagatatt
gctgagctgtcggacgatcaagttcgtacgcttatcaagaacctacgtggcggtctacca
atcgcgactccagtatttgacggtgcatctgagagaaacatcaaagatctacttaaactg
ggtgacctaccagaatctggtcagctaactctgtttgatggtcgtactggtgattcgttt
gagcgtcctgtaactgtaggttacatgtacatgctgaaactgaaccaccttgttgatgac
aagatgcacgcacgttcgactggttcgtacagcctagtaactcagcagccacttggtggt
aaagctcagttcggtggtcagcgtttcggtgagatggaagtatgggcactagaagcatac
ggtgctgcttacacccttcaagaaatgctaaccgttaagtcggatgacgtgaatggccgt
actaagatgtataagaacatcgtagatggcaaccacgcgatggaaccaggcatgcctgaa
tcgttcaacgtattgttgaaagagattcgctcgctaggtattaacatcgagctagaagac
gaagagtaa
DBGET
integrated database retrieval system
