Vibrio breoganii: A6E01_12810
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Entry
A6E01_12810 CDS
T04649
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
vbr
Vibrio breoganii
Pathway
vbr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vbr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A6E01_12810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vbr03019
]
A6E01_12810
Enzymes [BR:
vbr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A6E01_12810
Messenger RNA biogenesis [BR:
vbr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A6E01_12810
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
ANO34135
UniProt:
A0AAJ5EI52
LinkDB
All DBs
Position
1:2754376..2755671
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AA seq
431 aa
AA seq
DB search
MKKTHITEQKFADFDLHPDIITGLQTKGFEYCTPIQALALPVLLTGQDIAGQAQTGTGKT
LAFLTATFDYLLKNPADESRAVNQPRAIIMAPTRELAIQIHRDAEALIASTGLKAALAYG
GESYDKQLNELQQGVDILIGTTGRIIDFFKQKAFNLNHIQAVVLDEADRMFDLGFIKDIR
FLFRRMPEPKDRLNMLFSATLSYRVQELAFEHMNNPEHVEVEPERRTNVRIEEELFHPSN
EDKIALLMTLIEQDWPEKAIIFANTKYKCEQVWGYLAADEHRVGLLTGDIPQKKRERILE
QFTTGELDFLVATDVAARGLHIPLVTHVFNYDLPDDAEDYVHRIGRTGRAGESGHSISFA
CEEYAVNLPAIEEYIDHSIPASDYDPEALIQELPRPIRLQRSPNTRRQSGGKPQGRNNNQ
RRSRPSRPHNR
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagacacacatcacagagcaaaaattcgccgacttcgatttgcacccagatatt
atcactggattgcaaacaaaaggatttgagtattgtactccgattcaagcgttagcgctg
ccagtactgctcactggccaagacattgcggggcaagctcagacgggtactggtaaaaca
ttagcctttctaaccgctactttcgattacctacttaaaaaccctgccgatgagtctcga
gcagtgaaccaaccgcgcgccattattatggcaccaacgcgtgagttggctattcagatc
catcgtgatgctgaagctttgattgcaagcaccggccttaaagctgcgcttgcatatggt
ggtgaaagctacgacaagcagctgaatgagctacaacaaggtgttgatatcttgatcggt
actactggtcgtatcatcgatttcttcaagcagaaagcctttaaccttaatcatatccaa
gctgttgttcttgacgaagctgaccgtatgtttgacctgggtttcattaaagacattcgc
tttttgttccgtcgtatgccagagccaaaagatcgtcttaacatgcttttctctgcaacc
ctttcttaccgagtgcaagaacttgcgttcgaacacatgaacaatcctgagcatgtggaa
gtagaaccagagcgtcgcaccaacgtccgtatcgaagaagagctgttccacccttcaaat
gaagataagatcgctctgcttatgaccttgattgagcaagattggcctgaaaaagcgatc
atttttgccaatacaaaatacaaatgtgagcaagtctggggttacctagcagccgatgag
caccgtgtgggtcttttaacaggtgacattccgcagaaaaaacgcgaacgaattctagag
caatttactacaggcgaattagacttcttggttgcgactgatgttgctgcacgtggtcta
cacattccactggttacgcacgtatttaactacgacctaccagatgacgctgaagattat
gttcaccgtattggccgtacaggacgtgctggtgaaagcggtcattcaatcagttttgct
tgtgaagagtatgcagttaacctacctgcaatcgaagaatacatcgatcactcaattcca
gcatcagactatgaccctgaagctttgattcaagagttgccgagaccaattcgtcttcaa
cgctcaccaaacacccgtcgtcaaagtggtggaaaacctcaaggtcgcaataataatcag
cgacgcagcagaccatctaggccacataacagataa
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