Vibrio breoganii: A6E01_12835
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Entry
A6E01_12835 CDS
T04649
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
vbr
Vibrio breoganii
Pathway
vbr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vbr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A6E01_12835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vbr03019
]
A6E01_12835
03400 DNA repair and recombination proteins [BR:
vbr03400
]
A6E01_12835
Enzymes [BR:
vbr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A6E01_12835
Messenger RNA biogenesis [BR:
vbr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A6E01_12835
DNA repair and recombination proteins [BR:
vbr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
A6E01_12835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
zf-CXXC
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ANO34017
UniProt:
A0AAN0XWH8
LinkDB
All DBs
Position
1:complement(2759413..2761245)
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AA seq
610 aa
AA seq
DB search
MSTHLSMIEESDTQITPQRVLEDVFGYQEFRDGQQQVVDAALSGKDSLVIMPTGGGKSMC
YQVPMLVASGMGLVISPLISLMKDQVDQLKANGVAAECINSSMTREELLSVYNRMHQGKI
KLIYVSPERVLMHEFMERLQHLEINLIAIDEAHCISQWGHDFRPEYASLGQLKQQFSHVP
FMALTATADDTTRLDINGRLQLDDPLCYLGSFDRPNIRYTLVEKAKPVAQVIRYLATQKG
QCGIIYCGSRKKVEMVTEKLCNNGIRAMGYHAGMDPDERGYVQEAFQKDDIQIVVATVAF
GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMTLYDPSDINWLRRMLDEKE
DEQQKKVEMHKLNAMSAFAEAQTCRRQVLLHYFGEYREKACGNCDICIDPPKTFDGTEAA
RKALSCVYRVNQSFGMGYVTEVLRGMQNIRIRENGHDKLTTYGIGRDNSHDYWVSVMRQL
VHKGMLTQNIARNSTLQLTEEARPLLRGDMELELAVPRLDLTVSAKSDKTPTKHYDKKLF
AKLRNLRKRVADEEGLPPYVVFNDATLIDMADILPTSYGEMLAVNGVGQRKLDKYADAFL
DLIQEHITGV
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgtccacccatttgtctatgattgaggaatccgatactcaaataacaccgcagcgcgtg
ctggaggatgtgtttggctatcaggaatttcgcgacggccaacaacaggtggtggatgct
gcactctctggaaaggactctttggttatcatgcctaccggtggtggtaagtctatgtgt
taccaagtgcctatgctggtggcttctggaatgggcttggtgatatcaccgcttatctca
ttgatgaaggaccaagttgaccaattgaaagccaatggtgtggctgccgagtgtatcaac
tcaagcatgactcgtgaggagttgttgtcggtgtataaccgtatgcatcaaggcaaaata
aagttgatctatgtatcgccagaacgtgtgctcatgcatgagtttatggagcgtttgcag
cacttagagatcaaccttatcgccattgatgaagcgcactgtatctctcagtgggggcat
gactttaggcctgaatacgcgtctttgggtcagttaaaacagcaatttagccatgtaccc
tttatggcgttgaccgctacagcagacgatacaacgcgactcgatattaacggccgactg
caactcgatgaccctctttgttatctaggcagctttgatagacccaatattcgctatacc
ttggtagaaaaagccaagccagtcgctcaagtgattcgctatctcgcgacgcagaaaggt
cagtgcggcatcatttattgtggcagtcgcaagaaagtcgaaatggtgacggaaaaactc
tgcaataacggcattcgagccatgggctatcatgcgggaatggatccggatgagcgcggc
tacgtgcaagaagcgtttcaaaaagatgatattcagatcgttgtcgccaccgtagccttt
ggtatgggaatcaataaaccgaatgtgcgctttgttgtgcactttgatatcccaagaaac
attgagtcctactatcaggaaaccggtcgagcagggcgagatggcttgcccgctgaagcg
atgaccttgtatgacccatccgacatcaactggttgcgacgcatgcttgatgaaaaagag
gatgaacagcagaaaaaagtcgagatgcacaagttaaacgcaatgagtgcctttgctgaa
gcacaaacctgccgtcgacaagtcctgctgcattattttggtgagtatcgtgagaaagcg
tgtggtaactgcgatatctgtatcgatccgccaaaaacctttgatggtactgaggctgca
cgaaaggcgctctcttgtgtgtatcgtgttaatcagtcctttggtatggggtatgtgaca
gaagtgcttcgtggtatgcagaacatacgtattcgcgagaacggtcatgacaagctaacg
acttatggtataggtcgcgataatagccatgactactgggtgagtgttatgcgtcagttg
gtgcataaaggcatgctgactcaaaacattgcacgaaattcaaccttgcagctgacagaa
gaagccagaccgttattacgtggcgatatggaattagagcttgctgtgcctaggctggat
ctcacggtttctgccaaatccgacaagaccccaaccaaacactacgataagaagctgttt
gcaaaattacgtaatcttcgtaagcgcgtagctgatgaggaaggcttacctccttatgtg
gtgtttaacgatgctaccttgattgatatggctgatatcctgcctacttcgtatggtgaa
atgctggccgtaaatggagtggggcaacgcaaactcgataaatacgctgatgcctttctc
gatctaattcaggagcacattactggtgtctag
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