Vibrio breoganii: A6E01_12860
Help
Entry
A6E01_12860 CDS
T04649
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
vbr
Vibrio breoganii
Pathway
vbr03420
Nucleotide excision repair
vbr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vbr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A6E01_12860
03430 Mismatch repair
A6E01_12860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vbr03400
]
A6E01_12860
Enzymes [BR:
vbr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A6E01_12860
DNA repair and recombination proteins [BR:
vbr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A6E01_12860
MMR (mismatch excision repair)
Other MMR factors
A6E01_12860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_12
AAA_11
YccJ
PRA-PH
Motif
Other DBs
NCBI-ProteinID:
ANO34022
UniProt:
A0AAJ5EI54
LinkDB
All DBs
Position
1:complement(2766170..2768341)
Genome browser
AA seq
723 aa
AA seq
DB search
MDASLLLDGLNDKQREAVAAPLGNLLILAGAGSGKTRVLVHRIAWLMSVEQASPFSVMSV
TFTNKAAAEMRGRIEELMQGTASGMWNGTFHGICHRILRAHYLDAKLPEDFQIIDSDDQQ
RLLRRLIKAQNLDEKQWPAKQAAWWINGKKDEGLRPQHIDSYHDPVTKTWLRIYSVYQEA
CDRAGLVDFAEILLRCHELLRDKQHIREHYQARFKHILVDEFQDTNNIQYAWLRMMASPE
CNVMIVGDDDQSIYGWRGAKIENIQRFLNEFKQASTVRLEQNYRSTKNILTAANHLIANN
VERMGKELWTDGSDGELISVYSAYNELDEARFAVNKIKEWQDTGGALKDSAILYRNNAQS
RVIEEALIQAGLPYRIYGGMRFFERQEIRDALGYLRLMSNRNDDAAFERVVNTPTRGLGE
KTLETIRFAARDRGATLWQASNQLLEEKVFAGRAAGALGRFVELINALEDDTASMEMHKQ
TDHAIKASGLFTMYQQEKGEKAQARIENLEELVTATRQFEKPEEADEMSDLTAFLTHAAL
EAGEGQADEFDDAVQLMTLHSAKGLEFPLVFMVGVEEGMFPSQMSSEEAGRLEEERRLAY
VGMTRAMQKLYLTYAEMRRLYGQDKYHKPSRFIKELPEACVQEVRMKAQVSRPTNSGRFS
QTVKKESFNETGFSLGQRVSHPKFGEGTIINFEGSGAQSRVQVAFNGEGIKWLITQYAKL
ERL
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggacgcatcattattactcgacgggctcaatgataaacaacgagaagccgttgcagcc
ccattgggcaacctattgatcctagcgggcgcgggaagtggtaagactcgagtattggtt
catcgtattgcttggctgatgtctgtagagcaagcatcgccattttcggttatgtcggta
accttcaccaataaagccgccgctgaaatgcgtggccgtattgaagaactgatgcaaggc
actgcttctgggatgtggaatggtaccttccatggcatctgtcatcgtatccttcgcgcc
cactaccttgatgctaaattgccagaagactttcagattattgattctgatgatcagcag
cgcttactgcgacgtttgataaaggcgcaaaatctagatgaaaagcaatggccagcaaag
caagcagcttggtggatcaatggcaaaaaagacgaggggctaagacctcaacatatcgat
agctatcacgatccagtgactaagacctggctacgtatctattcggtataccaagaagcg
tgtgaccgagcgggtttagttgattttgctgaaattttgctgcgttgccatgagcttctg
cgagataagcaacatattcgtgaacactatcaggctcgctttaagcatatcttggtggat
gaattccaagataccaacaacattcagtatgcttggttgcgtatgatggcgagccctgag
tgtaacgttatgattgtcggcgatgatgaccaatctatttatggttggcgtggcgctaag
atagaaaacattcaacgcttcctgaatgagtttaagcaagcatcaaccgtgcgccttgaa
cagaattaccgttctactaagaacatacttaccgctgctaaccatctgattgccaacaac
gttgagcgtatgggtaaggagttgtggacggatggcagtgatggtgagctaatctctgtg
tattcagcctacaatgagctcgatgaggctcgctttgcggtcaataagatcaaagagtgg
caggatactggtggggcactaaaagactccgcaatcttgtatcgaaataatgcccagtcg
cgtgtgatcgaggaagctttgattcaagctgggttgccttatcgcatctacggcggaatg
cgattcttcgagcgtcaagaaatcagagatgcattgggttacttgcgcttaatgtcgaat
cgaaatgatgacgctgcctttgaaagggtggtgaacactcctactcgtggtctaggtgaa
aagacgttagaaaccattcgttttgcagcgcgagatcgtggcgcaacattatggcaagcc
agtaatcagcttctagaagaaaaggtctttgcgggtcgagccgcaggtgctctagggcgc
ttcgtcgaattaattaatgcccttgaagacgataccgcttcaatggaaatgcacaagcaa
actgaccatgccatcaaagcctctggcttgtttactatgtatcaacaggagaagggcgaa
aaggctcaggctcgcatagaaaaccttgaggaactggtcacggccacccgtcaatttgaa
aagcctgaagaggcggatgagatgagtgatcttaccgctttcctaacccacgctgctcta
gaagctggcgaaggtcaagctgatgaatttgatgatgcggtgcaattaatgaccctacac
agtgccaagggtctagagtttcctttggtcttcatggtgggcgtagaagaggggatgttc
ccgagccaaatgtcatcagaggaagcgggtcgactcgaagaagagcgcaggcttgcttat
gtgggaatgactcgagcgatgcagaaactgtacctcacttatgctgagatgcgccgtttg
tatggccaagataagtatcacaagccatctcgttttattaaagagttgccagaagcgtgc
gtgcaagaagtacgtatgaaggcgcaggtgagtcgaccaaccaatagtggacgctttagc
caaacggttaagaaagaaagctttaatgagactggatttagcttagggcagcgggtgagc
catccaaaatttggagagggcaccattattaactttgaaggaagtggtgcgcaaagccgt
gttcaggtggcctttaacggcgaaggaataaagtggctgattacccagtacgccaaactt
gagagattgtaa
DBGET
integrated database retrieval system
