Vibrio breoganii: A6E01_14655
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Entry
A6E01_14655 CDS
T04649
Name
(GenBank) RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
vbr
Vibrio breoganii
Pathway
vbr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vbr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A6E01_14655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vbr03019
]
A6E01_14655
Enzymes [BR:
vbr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A6E01_14655
Messenger RNA biogenesis [BR:
vbr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A6E01_14655
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SNF2-rel_dom
AAA_19
UvrD-helicase
AAA_22
HEM4
Cullin_binding
Motif
Other DBs
NCBI-ProteinID:
ANO34441
UniProt:
A0AAP8MU35
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All DBs
Position
2:356024..357217
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AA seq
397 aa
AA seq
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MPFTKLGLSTPILNAINKVGYDKPTPIQEKAIPIVLEGKNLIAAAQTGTGKTASFVLPIL
EMLSKGETQRKKRIRALIVVPTRELAIQVDEKIKQYAEETKLTSMAMYGGVEYQPQKQGL
IDGVDVLVSTPGRLIDLYGQKAVYFEEVEVLVLDEADRMLDMGFIEDINKIIARLPQDIQ
NLLFSATLSNPVRDLAKSAINDAVEISIAKHSASKSNIEQWLVTVDKDKKSSLLAHMINE
NQWDQALIFIETKHGAAKLAAQLEKRGIAAEPFHSGRNQKVRAQLLEDFKAGKIQYMIAT
GIGARGIDIDGLPRVINYDLPYPADEYVHRIGRTGRADKNGEAISFVSRDNFKNLCMIES
RLGHLIERREIEGFVPSKEVPISILNYVPKHKREPND
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgccatttaccaagcttggtttaagcacacctatcctcaatgccatcaataaagttggt
tacgataagcccacacccattcaagaaaaagcgattccgatcgtcctagaagggaagaac
ttgattgcggcagcgcagacaggtacgggtaagacggcgagctttgtattgcctattttg
gagatgctaagcaaaggcgaaactcagcgtaagaagcgtattcgcgccttgatagtggta
ccaacccgtgaactagcgattcaggtggatgaaaagatcaagcaatacgctgaagagacc
aaactcacctctatggccatgtatggcggggtagagtatcagccgcagaagcaaggcctc
attgatggtgtggatgtactggtttcaacgccgggacgcttgattgatctttatggtcaa
aaagcggtgtactttgaagaagtcgaagtgctggtacttgatgaagcggaccgcatgttg
gacatgggctttattgaagacatcaacaagatcattgctcgcctgccacaagatattcaa
aacctgttgttctcagcaaccttgtcgaacccggttcgcgaccttgcaaagagcgcaatt
aatgacgcggtagagatctctattgctaagcacagtgcttcgaagtcgaatattgagcag
tggctggtgacggtagataaagataagaaatcttctctattggctcacatgatcaatgag
aatcaatgggatcaagcccttatctttattgaaaccaaacacggcgcagccaagctagcg
gctcaacttgagaagcgtggcattgctgcagaacctttccatagtggccgcaaccaaaag
gttcgagctcaactgcttgaagacttcaaggcaggcaagatccagtacatgattgcaacc
ggcattggtgcgcgtggtatcgatattgacgggcttccgcgagtgattaactacgacctg
ccttatcctgcggatgagtatgtgcatcgtattgggcgtacaggtcgagcggacaagaac
ggtgaagctatctcgtttgtgtctagagataactttaagaacctttgcatgattgaaagt
cgtcttggtcacttaattgaaaggcgtgaaatcgagggctttgttccaagcaaagaagtg
ccgatctcgatcttaaactacgtaccaaaacataagagagagcctaacgattag
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