Vibrio breoganii: A6E01_16305
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Entry
A6E01_16305 CDS
T04649
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
vbr
Vibrio breoganii
Pathway
vbr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vbr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A6E01_16305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vbr03019
]
A6E01_16305
Enzymes [BR:
vbr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A6E01_16305
Messenger RNA biogenesis [BR:
vbr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A6E01_16305
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
P-loop_SecA
AAA_22
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
ANO34752
UniProt:
A0AAN0XXR0
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All DBs
Position
2:complement(740832..742103)
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AA seq
423 aa
AA seq
DB search
MSSSQFAALGLDAILVEQLDKLNFVTPTPVQLEGIPHVLEGRDVLAAAQTGTGKTAAFGL
PIIQNLMGQVSVHNTQSPCKVKALVLVPTRELAQQVFDAITQYAEPTEVKTVVVYGGTSF
NVQASNLNKGCDILVATPGRLLDHLFNKTLTLQHTKYLVLDEADRMLDMGFMPDIKRILQ
KLSPDRQTLFFSATFKKGVKNLAYKILDNPVEVEVSPANSTADAVEQMVYPVDKKRKREL
LSYLIGSRNWQQVLVFTRTKEGAESVAKELKLDGIQAASLHGDKSQGARQRALDDFKIGK
VRALVATDVAARGIDVKELEHVINFDMPYKAEDYIHRIGRSGRAGNKGHAVSLMSHNEQY
LLEAIERLLDAKLPQEWLEGFEPSPESEILEETGGHRRSRSAEKRKMKAKMGVHKNRGKS
RGR
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcatcacaatttgctgcacttggccttgatgctattctcgttgagcagctagat
aagctgaactttgtcactcctacacccgttcaacttgagggaattcctcacgttcttgag
ggaagagacgtactcgcagctgctcagacaggcacaggtaaaaccgcggcatttggtcta
cctattattcaaaacttgatggggcaggtgagcgttcataacactcaatcgccctgcaag
gtaaaggcattggttctcgtgccaacacgagagctagctcagcaggtgtttgacgctatt
acgcaatacgctgagccaaccgaagtgaagacggtggttgtgtacggcggtacgagcttt
aatgtacaggcgagtaacctaaacaaggggtgtgatatcttagtcgccacgcccggccgt
ttattggatcatctgtttaataagacactcactctacaacatacgaaatatctagtgctt
gatgaagctgatcgaatgctagacatgggctttatgccagatattaagcgtattttgcaa
aaactcagccctgatcgccaaacgctattcttctccgcgacgttcaaaaaaggcgtaaaa
aaccttgcctataagatccttgataatcctgttgaagtggaagtcagccctgcaaattca
actgctgatgcggtcgaacaaatggtttacccagtcgataagaagcgtaaacgagagcta
ctttcgtacctgataggttcaagaaactggcaacaggtgctggtctttacccgcactaaa
gaaggcgcagaatctgttgcaaaagagcttaaactggacggaatccaagcggcgtctttg
catggtgataaaagccaaggcgcaaggcagcgtgcactcgatgactttaaaataggtaag
gtgagggcgctggtggcaacggacgttgcggcacgtggcattgacgtgaaagagctagag
catgtgattaactttgatatgccgtataaagccgaagactacatacaccgaattggccgt
agtggacgcgctggcaacaaaggccacgccgtatcattaatgagccacaacgagcagtac
ttacttgaagcgattgaaagattgcttgatgccaagttacctcaagagtggctagaaggc
tttgaaccaagcccagagtctgagatccttgaagaaacaggcggtcaccgccgcagtcgc
agcgccgaaaagcgcaaaatgaaagcgaaaatgggcgtacataagaaccgaggtaagagc
cgcggaaggtaa
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