Vibrio breoganii: A6E01_16900
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Entry
A6E01_16900 CDS
T04649
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
vbr
Vibrio breoganii
Brite
KEGG Orthology (KO) [BR:
vbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vbr03009
]
A6E01_16900
Enzymes [BR:
vbr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
A6E01_16900
Ribosome biogenesis [BR:
vbr03009
]
Prokaryotic type
rRNA helicases
A6E01_16900
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GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_19
Cas3-like_C_2
AAA_30
CMS1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ANO34866
UniProt:
A0AAJ5EMF0
LinkDB
All DBs
Position
2:complement(886425..887804)
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AA seq
459 aa
AA seq
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MSDNKFSKLPLSQSLLDNLTSMEYSEMTPIQAQSLPLMLNGKDVIGQGKTGSGKTAAFGL
SLLTNLNVKRFRVQSLVLCPTRELADQVAKEIRKLARTIHNIKVLTLCGGMPMGPQIGSL
EHGAHILVGTPGRILDHLERGRINLAELNTLVLDEADRMLDMGFQDALDAIVAEAPKQRQ
TLLFSATFPEKIQQVAARIMQDPQLVKVESTHEQSTISQHFYKVGDDKQRMQALETLLLT
HQPESAVIFCNTKREVQEVADELHYKGFSVIDLHGDLEQRERNQTLVQFSNKSISILVAT
DVAARGLDVENLDAVINYQLSRDPEVHVHRIGRTGRAGSKGVACSLFNDKEHHRVAMIDE
YMDIAIEPEALPQTSNNKPLQPTMVTIEISGGKKQKVRAGDILGALTGQNGIDGKMVGKI
NLFDMRAYVAVDKSLAKVAHKKIENGKMKGRKFRARILS
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgacaataaattttctaagttacctttatctcagtcattgcttgataatttgacg
tcgatggagtattccgagatgacgcctatacaggcgcaaagcttaccgttgatgctaaat
ggcaaagacgtcattggtcagggcaaaaccggatcaggtaaaacagcagcgtttggtcta
agccttttaactaaccttaatgtgaagcgatttcgcgtacagtcattggtattgtgccca
actcgtgagttggctgaccaagtagcaaaagagatccgcaagctggcacgtacgattcac
aacattaaggtgctcaccttgtgtggtggtatgcctatggggccgcaaattggttctctg
gagcacggtgcacacattttggtaggtacacctggtcgtattcttgatcacttggaaaga
ggtcgtatcaatctagcagagctgaatacactagtgctagatgaagctgacagaatgtta
gacatgggctttcaggatgctttagatgcgattgtggctgaagcgccgaaacaacgccaa
accttgctatttagtgccacattccctgaaaaaattcagcaggttgcggctcgcattatg
caagacccacaactggtgaaggttgagtctactcatgagcaaagcactatttctcaacat
ttctacaaagtaggtgatgacaagcagcgtatgcaagcattggagacattgttgctgaca
caccaacctgaatctgcggtgatcttctgtaataccaagcgagaagttcaagaagtcgca
gatgagcttcattacaaaggctttagcgttattgacctgcacggtgacctagagcaacgt
gagcgcaaccagacactcgttcagttctcaaataagagtatctcgattcttgttgccact
gatgttgcagcacgtggactcgatgttgaaaacctagatgcggttattaactatcagcta
tctcgcgatccagaggtgcacgtgcaccgtatcggtcgtactggccgtgcaggcagtaaa
ggtgtagcgtgcagtctgttcaacgacaaagaacatcaccgcgttgccatgatcgatgaa
tacatggacattgccatcgaaccagaagcgcttccacagacttcgaacaacaaaccgctt
cagccaaccatggtgaccatagaaatctctggtggtaagaagcaaaaagtgagagcaggg
gacattcttggtgccttaacgggtcaaaatggcattgacggtaaaatggtaggtaaaatc
aacctgtttgatatgcgtgcttacgtagctgtcgataagtcattggctaaggttgcacac
aagaagatcgaaaacggcaaaatgaaaggacgtaagtttagagctcgcattctttcttaa
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