Vibrio breoganii: A6E01_20625
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Entry
A6E01_20625 CDS
T04649
Name
(GenBank) hypothetical protein
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
vbr
Vibrio breoganii
Pathway
vbr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vbr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
A6E01_20625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vbr03400
]
A6E01_20625
Enzymes [BR:
vbr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
A6E01_20625
DNA repair and recombination proteins [BR:
vbr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
A6E01_20625
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A6E01_20625
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
A6E01_20625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Exonuc_X-T_C
DUF1737
Motif
Other DBs
NCBI-ProteinID:
ANO35619
UniProt:
A0AAN0Y0C0
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All DBs
Position
unnamed1:complement(295207..296616)
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AA seq
469 aa
AA seq
DB search
MPFILSATPEFPSKSFSSLFMYDVETSGLEHAHSQITEFGAISCDMNLEERTRIEELVVP
RADIIPAVEAYEVTKIDVDDQMQKGITERQLAEKVKSALGKGAVLAGYNNIAFDNTSIRH
LFYRNNISVFEHERFALNSTLDVLQLVRMCYTYRPGILNFKLKEDGIKPCMKLESMCSAN
GIELTNAHAAMADIFATLELAKIIKQRAPDLFDFVLNWDKFRVVETAEMGCAVFYSAMFH
SVNKRYTKCILPILVTKNVIYAIDLAKNPSEVTEKDLIRLYPNKLPMLRAADQYAHACFK
RFDLDAKASEQHYHVAQQEMDKLKALATQHERENGFKKLEDLSLNERIYDFFSREEESLR
RQLFKMESSEFTTENLGTSVDGSDSRVIELALCQNYLQRPELDAKTISEADRAILKKHLA
RVFSPSEHLTETEQKLNNIESSNRLSSVKRTLLKVKALHERNKAFYAEL
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgccgtttattttgtctgcaacaccagagtttccatctaagtctttttcttctctattt
atgtatgacgttgaaacatctggacttgagcatgctcattcacaaatcaccgaattcggt
gcgatctcatgtgacatgaacctagaagagcggacaagaatcgaagaactagtggtacca
cgcgctgacatcataccggcggttgaagcttacgaagttaccaagattgatgtcgacgac
caaatgcaaaaaggcattacagagcgtcaacttgcggaaaaggtcaaaagcgcgttaggt
aaaggggctgtgctagcgggttataataatattgcctttgataacacgtccattcgccac
ctattttatcgaaataacatcagtgtattcgagcacgagcgcttcgccctgaactctaca
cttgatgtacttcaactagttcgcatgtgttacacctatcgacctggcattttaaatttc
aagctaaaggaagatggcattaagccatgcatgaagctggaatcaatgtgctctgctaac
ggcattgaattgaccaacgcccacgccgcaatggccgatatatttgcgaccctagaactt
gccaaaatcatcaagcaacgcgctcccgatcttttcgacttcgttcttaactgggataag
tttcgcgtcgtggaaacggcagaaatggggtgcgctgtattctatagcgccatgttccac
tccgttaataaacgctatacaaaatgcatcttgccaatcctcgtcaccaagaacgtgatt
tacgcaattgaccttgcaaagaatcccagcgaagtaacagaaaaagacctgatcaggctt
tacccaaacaagctaccaatgttacgcgcggctgaccaatacgcccacgcttgctttaaa
cgattcgacttagacgccaaagcctctgagcaacactaccatgtcgcccaacaagagatg
gacaaactcaaggcactagcaacacaacacgagcgtgagaatggcttcaagaagctagaa
gacctctctctcaatgagcgtatatatgacttctttagcagagaggaggaatcacttcgc
cgccaactcttcaaaatggagagcagtgagttcacaactgaaaatcttggcacatcagtg
gatggcagtgacagtcgagtgatcgaattagcactttgccagaactacttacagagacca
gaactcgatgccaaaaccatttccgaggctgacagagcaatcctgaaaaaacacttagcc
agagtattctcgccatccgaacacctgacggaaacagagcaaaagctaaataacatcgag
agctctaatcggctaagtagcgtcaaacgcaccctactcaaagtcaaagcactacatgag
cgcaataaagcgttctacgcagaactttaa
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