Verrucomicrobia bacterium S94: EGM51_02300
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Entry
EGM51_02300 CDS
T05990
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
vbs
Verrucomicrobia bacterium S94
Brite
KEGG Orthology (KO) [BR:
vbs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vbs03016
]
EGM51_02300 (truB)
Enzymes [BR:
vbs01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
EGM51_02300 (truB)
Transfer RNA biogenesis [BR:
vbs03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
EGM51_02300 (truB)
Prokaryotic type
EGM51_02300 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
QBG46289
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All DBs
Position
complement(517733..518461)
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AA seq
242 aa
AA seq
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MRNRRRRAPDPYDGILLVDKPTDWTSHDVVAKIRNYFKLSKCGHGGTLDPLATGLLVLLI
GKGTKLSDRIMNGDKVYEGTLHLGVTTNTQDADGEILEEKDASHVTREMVENVIAEQFMG
PIEQIPPMVSAIKKDGVPLYKMARKGQEIEREPRKIEVFEFDVLEFENPLVKFRVKSTKG
TYVRTLAFDIGNALGVGGSLDALRRTGSGPLSVDKAYTLDEILACDRETLCEKMILLEDL
LK
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgagaaatcgtaggcgccgcgctccggatccatacgacggcattctgctggtcgataaa
ccgaccgactggacttcacacgacgtcgtcgcaaaaatccgcaactatttcaaactgagc
aaatgcggccatggcggaacgctcgatcccctcgccaccggtctgctggtactgctgatc
ggaaaaggtaccaaactgtccgaccgcatcatgaacggcgacaaagtctatgaaggcact
ctgcacctcggtgtgaccaccaatacgcaggatgccgacggcgagattctcgaagaaaaa
gacgcttcgcacgtcacccgcgaaatggttgaaaacgtgattgccgaacagtttatgggt
ccgatcgagcagatcccgccaatggtttcagccattaaaaaggacggcgttcctctttat
aaaatggcgcgcaaaggacaggaaattgaacgcgaaccccgtaaaatcgaagtcttcgaa
ttcgatgtgctggagtttgaaaatcctctggttaaattccgcgtgaaaagcacaaaagga
acttatgtccgaaccctcgcgttcgacatcggcaatgccctcggagtcggcggaagcctc
gatgccctgcgccggaccggctccggcccgctctcggttgacaaggcctatacactggac
gaaattcttgcgtgcgatcgcgagacactctgcgaaaaaatgatccttctggaagattta
cttaaatga
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