Verrucomicrobia bacterium S94: EGM51_06595
Help
Entry
EGM51_06595 CDS
T05990
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
vbs
Verrucomicrobia bacterium S94
Pathway
vbs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vbs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EGM51_06595 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vbs03019
]
EGM51_06595 (rny)
Messenger RNA biogenesis [BR:
vbs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EGM51_06595 (rny)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
KH_KhpA-B
KH-I_KHDC4-BBP
HDOD
KH_2
WPP
SSPI
Motif
Other DBs
NCBI-ProteinID:
QBG47078
UniProt:
A0A4P6PBQ7
LinkDB
All DBs
Position
1597007..1598632
Genome browser
AA seq
541 aa
AA seq
DB search
MVPLNASGFPWSAVYRETEVTVEFASYTGFEFILSIGFLVLGFFFHAYITKTNAIAASKQ
AKAILNEAQKEAEVVRREAKVQAKDAILRARENSQREFAKQRTDILDLEKRVVNREKNLT
SKLEMLNNKELQLTGRMAEISEQKDALRAKESELNRLIREETRRIEDVASLSREEARKII
MARMEEELQAEADSLIRRYQKEAKEEARKRAREIVVTAIQRYSAETVNDVTTSQVSLESD
DIKGRIIGKEGRNIKSFEAETGVNVLIDETPEVVVLSCYDPIRREIARVALERLIEDGRI
HPARIEETVEKVKEEIDDTIRRAGEEALFGLGISGVAPELVHILGKLKFRTSYNQNVLDH
SVEAAHLIAMMAADLGLDPKIAKRCGIFHDIGKALDHEMEGGHAEIGAKILRKYGEEQVV
WEAVASQHEGLDVHNIYGVLCDAADALTAARPGARMETTDIYIERLEKIELICNQYAGVK
SSYAVQAGREIRIMVEPEKFNDHGASLLAKNIAKQIGKEVKIPGTVRVTVIRETRCVEYA
K
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggtgccattgaatgcatcgggttttccatggagtgcggtctatcgtgaaacggaggtt
accgtggaatttgcaagttacacaggttttgaatttatcctgagcatcggctttctggtg
ctggggttcttctttcatgcctatattactaaaaccaatgccattgccgcgagcaaacag
gccaaggcgattctgaacgaagctcagaaggaagccgaagtcgtacgccgcgaggccaag
gtgcaggcgaaagatgccatccttcgtgcacgcgaaaactcccagcgggagtttgccaag
caaaggaccgatattcttgatctggaaaaaagggtcgtcaatcgggaaaaaaatctgacc
agcaaactggagatgcttaataataaggagcttcagctgaccggacggatggcggagatc
agcgagcagaaagatgcattacgggcgaaggaaagcgaactgaaccggttgatccgcgaa
gaaacccgccggatcgaggatgttgccagcctgtcccgtgaggaggcacggaaaattatt
atggcccgcatggaggaggaactgcaggcggaagccgacagcctgatccggcgttaccag
aaagaggccaaagaagaagcccggaaacgggcccgcgaaattgtggtgaccgctatccag
cgttattctgccgaaacggtcaatgatgtgaccaccagccaggtcagcctggaaagcgat
gatataaaaggacgcatcatcggcaaggaaggccgaaatattaaatcatttgaagccgaa
accggagtcaatgttctcattgatgaaaccccggaagttgttgtgctctcgtgctatgac
ccgatccgccgtgaaattgcgcgtgtggctttggaacgcctgattgaagacggtcgtatt
catcctgcccgtattgaggaaaccgtggaaaaagttaaagaagagatcgacgacaccatc
cgccgcgccggcgaggaagccctgttcggtctgggtatttccggcgtcgctccggaactg
gtgcatattctcggcaagcttaaattccggaccagctataatcagaacgtcctggatcat
tccgtggaagccgcacacctgattgccatgatggccgccgacctcggactggatccgaaa
atcgccaaacgttgcggtatttttcacgacatcggcaaagcgctggatcatgaaatggaa
ggtggccacgcggaaatcggcgcgaaaattctgcggaaatacggcgaagaacaggtggtt
tgggaagccgtcgcttcacagcacgaaggccttgatgtccacaatatctatggggtactt
tgcgatgccgccgatgcgctgaccgccgcccgtcccggcgcccgtatggaaaccacggac
atctatattgaacgactggaaaaaatcgagctgatttgcaatcagtatgccggtgttaaa
agcagttatgccgttcaggcgggacgtgaaatacgtattatggtcgagcccgaaaagttc
aatgaccacggagcctcattgctcgcgaaaaatattgccaagcagatcggtaaggaagtt
aaaatccccggaacagttcgcgtgacggtaatccgcgaaacacgatgcgttgaatacgca
aaataa
DBGET
integrated database retrieval system