KEGG   Verrucomicrobia bacterium S94: EGM51_06595
Entry
EGM51_06595       CDS       T05990                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
vbs  Verrucomicrobia bacterium S94
Pathway
vbs03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:vbs00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    EGM51_06595 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vbs03019]
    EGM51_06595 (rny)
Messenger RNA biogenesis [BR:vbs03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     EGM51_06595 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 KH_KhpA-B KH-I_KHDC4-BBP HDOD KH_2 WPP SSPI
Other DBs
NCBI-ProteinID: QBG47078
UniProt: A0A4P6PBQ7
LinkDB
Position
1597007..1598632
AA seq 541 aa
MVPLNASGFPWSAVYRETEVTVEFASYTGFEFILSIGFLVLGFFFHAYITKTNAIAASKQ
AKAILNEAQKEAEVVRREAKVQAKDAILRARENSQREFAKQRTDILDLEKRVVNREKNLT
SKLEMLNNKELQLTGRMAEISEQKDALRAKESELNRLIREETRRIEDVASLSREEARKII
MARMEEELQAEADSLIRRYQKEAKEEARKRAREIVVTAIQRYSAETVNDVTTSQVSLESD
DIKGRIIGKEGRNIKSFEAETGVNVLIDETPEVVVLSCYDPIRREIARVALERLIEDGRI
HPARIEETVEKVKEEIDDTIRRAGEEALFGLGISGVAPELVHILGKLKFRTSYNQNVLDH
SVEAAHLIAMMAADLGLDPKIAKRCGIFHDIGKALDHEMEGGHAEIGAKILRKYGEEQVV
WEAVASQHEGLDVHNIYGVLCDAADALTAARPGARMETTDIYIERLEKIELICNQYAGVK
SSYAVQAGREIRIMVEPEKFNDHGASLLAKNIAKQIGKEVKIPGTVRVTVIRETRCVEYA
K
NT seq 1626 nt   +upstreamnt  +downstreamnt
atggtgccattgaatgcatcgggttttccatggagtgcggtctatcgtgaaacggaggtt
accgtggaatttgcaagttacacaggttttgaatttatcctgagcatcggctttctggtg
ctggggttcttctttcatgcctatattactaaaaccaatgccattgccgcgagcaaacag
gccaaggcgattctgaacgaagctcagaaggaagccgaagtcgtacgccgcgaggccaag
gtgcaggcgaaagatgccatccttcgtgcacgcgaaaactcccagcgggagtttgccaag
caaaggaccgatattcttgatctggaaaaaagggtcgtcaatcgggaaaaaaatctgacc
agcaaactggagatgcttaataataaggagcttcagctgaccggacggatggcggagatc
agcgagcagaaagatgcattacgggcgaaggaaagcgaactgaaccggttgatccgcgaa
gaaacccgccggatcgaggatgttgccagcctgtcccgtgaggaggcacggaaaattatt
atggcccgcatggaggaggaactgcaggcggaagccgacagcctgatccggcgttaccag
aaagaggccaaagaagaagcccggaaacgggcccgcgaaattgtggtgaccgctatccag
cgttattctgccgaaacggtcaatgatgtgaccaccagccaggtcagcctggaaagcgat
gatataaaaggacgcatcatcggcaaggaaggccgaaatattaaatcatttgaagccgaa
accggagtcaatgttctcattgatgaaaccccggaagttgttgtgctctcgtgctatgac
ccgatccgccgtgaaattgcgcgtgtggctttggaacgcctgattgaagacggtcgtatt
catcctgcccgtattgaggaaaccgtggaaaaagttaaagaagagatcgacgacaccatc
cgccgcgccggcgaggaagccctgttcggtctgggtatttccggcgtcgctccggaactg
gtgcatattctcggcaagcttaaattccggaccagctataatcagaacgtcctggatcat
tccgtggaagccgcacacctgattgccatgatggccgccgacctcggactggatccgaaa
atcgccaaacgttgcggtatttttcacgacatcggcaaagcgctggatcatgaaatggaa
ggtggccacgcggaaatcggcgcgaaaattctgcggaaatacggcgaagaacaggtggtt
tgggaagccgtcgcttcacagcacgaaggccttgatgtccacaatatctatggggtactt
tgcgatgccgccgatgcgctgaccgccgcccgtcccggcgcccgtatggaaaccacggac
atctatattgaacgactggaaaaaatcgagctgatttgcaatcagtatgccggtgttaaa
agcagttatgccgttcaggcgggacgtgaaatacgtattatggtcgagcccgaaaagttc
aatgaccacggagcctcattgctcgcgaaaaatattgccaagcagatcggtaaggaagtt
aaaatccccggaacagttcgcgtgacggtaatccgcgaaacacgatgcgttgaatacgca
aaataa

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