Verrucomicrobia bacterium S94: EGM51_10285
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Entry
EGM51_10285 CDS
T05990
Name
(GenBank) hypothetical protein
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
vbs
Verrucomicrobia bacterium S94
Pathway
vbs03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
vbs00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
EGM51_10285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vbs03019
]
EGM51_10285
03009 Ribosome biogenesis [BR:
vbs03009
]
EGM51_10285
Messenger RNA biogenesis [BR:
vbs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EGM51_10285
Ribosome biogenesis [BR:
vbs03009
]
Eukaryotic type
Pre-60S particles
RNases
EGM51_10285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QBG47760
LinkDB
All DBs
Position
complement(2401909..2402526)
Genome browser
AA seq
205 aa
AA seq
DB search
MSETIKKTSAYVWFDAEFTSLDLENARLLQVAAIITDTELNRLHPQSADLNLCIRLDAEE
QVSEWVEEHLSELLARCRSEEAVTVAEADRRIAEMLDEYAGTPFDAISDRPVLAGNSVHN
DWVLMRRFLPMFGSRLHYRLLDVSTIKIQWMDLKGQAAFDKDNVELLSRYFPEAGIDAAN
AHDALFDIKASIAELAYYRTQLFTR
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaacgattaaaaaaacatccgcctatgtctggttcgatgccgaatttacttcg
ctcgatctggaaaacgcacggcttttacaggttgctgcgattattaccgataccgagttg
aaccgtctgcatcctcaatcggccgatctcaacctttgcatccggcttgatgcggaggag
caggtcagtgagtgggtggaggaacatctttcggagctgctggcccggtgccggtcggaa
gaggcggtgaccgttgcagaggcggatcgccggattgcggaaatgctggacgaatatgcc
ggaaccccttttgatgccatttctgaccggccggtgcttgccggcaacagcgtgcacaac
gactgggtgctgatgcggcgatttcttcccatgttcggaagccggcttcattaccgtctt
ctggacgtctcgaccattaaaatacagtggatggacctcaaagggcaggcagcattcgat
aaggacaatgtggagctgctgagtcggtatttcccggaagcgggaattgatgccgccaac
gcgcacgatgcattgtttgacatcaaagcttctatcgctgagctggcgtattaccggact
cagctgtttactcgttga
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