Verrucomicrobia bacterium S94: EGM51_10305
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Entry
EGM51_10305 CDS
T05990
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
vbs
Verrucomicrobia bacterium S94
Pathway
vbs03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
vbs00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EGM51_10305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vbs03021
]
EGM51_10305
03400 DNA repair and recombination proteins [BR:
vbs03400
]
EGM51_10305
Enzymes [BR:
vbs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EGM51_10305
Transcription machinery [BR:
vbs03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
EGM51_10305
DNA repair and recombination proteins [BR:
vbs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
EGM51_10305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
QBG47763
UniProt:
A0A4P6PGT2
LinkDB
All DBs
Position
complement(2405580..2406584)
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AA seq
334 aa
AA seq
DB search
MPTRLGRFEMPKQVVKDDAVSTENYGKFYAEPFEGGYGRTMGNSLRRVLLSSLEGAAVSS
VKIKGAPHEFCSLEGVTEDVTDIVLNIKQLLFKSYSRDTQIVKVKVEGPGEVKAGDIQTP
ETIEVLNPDFVICTLQEDGVFEAEMEVRIGRGYCPAELNKKENQEIGVIPIDCLFSPVRR
VKYETENTRVGRRTDYDKLVIEIWTDGRVTPDDALTMSAAILRHHLDVFVSYDKDLIEFE
ESEKQIDMEKEELRKKLNISVNEIELSVRAANCLNNANITTVGELAQKTEAEMLKYRNFG
KKSLNEIKAKIQEMGLSLGMTFDADLLKGVYSED
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgcctactcgtctcggtcgattcgaaatgccgaaacaggttgtcaaagacgacgctgtt
tccacagaaaactacggtaagttctacgcggaaccgtttgaaggcggctatggccgtact
atgggtaactcgttgcgccgtgtactgctgtcttcattggaaggtgcggcggtttcatcg
gttaaaatcaaaggtgcaccgcacgaattctgcagtcttgaaggcgtaacagaagatgtg
accgacattgtgctgaacatcaaacagttgctttttaagagttattccagagacacgcag
atcgttaaagtcaaggtggaaggccccggtgaggttaaggccggtgatatccagaccccg
gaaacgattgaagtgctcaatcccgattttgtgatctgcacgcttcaggaagacggcgtg
ttcgaagctgagatggaagttcggatcggacgtggctactgcccggctgaattgaataaa
aaagaaaatcaggaaatcggcgtgattccgatcgattgtctgttttcgccggttcgtcgc
gtaaagtatgaaacggaaaatacccgtgttggccgtcgtaccgactacgataaacttgtg
attgaaatctggaccgacggaagggttacaccggatgatgcgttgaccatgtctgccgcg
attctgcgacatcatctcgatgtctttgtttcgtacgacaaagacctgattgagtttgag
gaaagcgaaaaacagatcgatatggagaaggaagaactccgtaagaaactgaatatcagc
gtcaatgaaattgaactcagtgtacgtgcggccaactgcctgaataacgctaacatcacc
acggttggcgaacttgcgcagaagacggaagcagagatgctgaaatacagaaacttcggt
aagaaatcgctgaatgaaatcaaggcgaagatccaggagatggggctgtcgctgggaatg
accttcgatgcagacctgcttaagggtgtgtactctgaagactaa
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