Verrucomicrobia bacterium S94: EGM51_10905
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Entry
EGM51_10905 CDS
T05990
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
vbs
Verrucomicrobia bacterium S94
Pathway
vbs00730
Thiamine metabolism
vbs01100
Metabolic pathways
vbs01240
Biosynthesis of cofactors
Module
vbs_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
vbs00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
EGM51_10905 (thiC)
Enzymes [BR:
vbs01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
EGM51_10905 (thiC)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
QBG47879
UniProt:
A0A4P6PJ85
LinkDB
All DBs
Position
complement(2510823..2512736)
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AA seq
637 aa
AA seq
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MIQEKHTYDDYGTDYPNSRKVYITGSRPDIRVPMREIRLTDTKRADGSVEENPPVMVYDT
SGPMTDPNYTLDLEKGLPKLREAWIEERGDTVKVEARGFQPGDDGQGGDVNRMPFRSSDK
TVRVAKTGANVSQMHYARKGIITPEMEFIAIRENLGRQEAFKSVYMKSEHDTGLLKQAQT
AGMRSPHHQHPGQSFGANIPDFITPEFVRDEVAAGRAIIPANINHPEAEPMIIGRNFLVK
VNANIGNSAVTSSIGEEVEKVQWSTLWGADTIMDLSTGENIHDTREWNLRNCPVPVGTVP
IYQALQKVGERPEDLTWELFRDTLIEQAQQGVDYFTIHAGVRLRYVPMTAQRVCGIVSRG
GSIMAKWCVSHHKESFLYENFHEICEICKQYDVSLSLGDGMRPGAIADANDEAQLGELET
LGELTKMAWEHDVQVMIEGPGHVPLHGVKENMEWELDVCHEAPFYTLGPLTTDVAPGYDH
ITSGIGAANIGWYGCAMLCYVTPKEHLGLPNKEDVKTGVITYKIAAHAADLAKGFPGAQV
RDNALSKARFEFRWEDQFNLALDPVTARSYHDSTLPGEEAKTAHFCSMCGPKFCSMRISE
DVRQYAAEQGLSEEEAIEKGMQEKSQEFTEQGAEIYT
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgattcaggaaaagcatacgtatgacgactatggaaccgattaccccaattctcgtaag
gtttatatcaccggaagtcgaccggatatccgggtgccgatgcgtgaaatcaggttgacg
gatacaaaaagagccgatggatcggtcgaggaaaacccgccggtgatggtgtatgacacc
agcggaccgatgacggacccgaattacacgcttgatcttgaaaaagggctgccgaaactg
cgtgaggcgtggattgaagagcgcggcgataccgtcaaagtcgaagcccgtggttttcag
ccgggcgatgacgggcagggcggcgacgtcaaccgcatgccgttccggtcatcggataaa
acggtgcgtgttgcgaaaaccggggcgaatgtttcgcagatgcattatgcgagaaaaggc
attattacgccggagatggaatttattgcaatccgcgaaaacctcggccgccaggaagct
tttaaatcggtctacatgaaatccgagcatgacaccggtctgctgaagcaggcgcagacc
gccggtatgcgttctccgcatcatcagcatccgggtcaatcgttcggggccaatattccg
gattttattacgcctgaatttgttcgtgacgaagtggcggcggggcgtgcgattattccg
gcgaacatcaaccatccggaagcggaaccgatgattatcggccgcaattttctggtgaaa
gttaatgccaatatcggtaattcggcggtgacatcgagtatcggcgaagaggttgaaaaa
gtgcagtggtcgacgctttggggcgcggatacgattatggatctttccactggggaaaat
attcatgatacgcgtgaatggaatctgcgtaactgcccggtgccggtcggtacggttccg
atttatcaggcattgcagaaagtgggtgagcggccggaggatctgacctgggagctgttc
cgtgatacgctgattgagcaggctcagcagggcgtcgactattttacgatccatgccggc
gttcgactgcgttatgtgccgatgacggcacagcgggtctgcggtattgtcagtcgtggc
ggatcgatcatggcgaagtggtgtgtgtcgcatcataaagagagttttctttacgaaaat
tttcacgaaatctgtgaaatctgcaaacagtacgacgtttcgctgtcgctgggcgacggc
atgcgcccgggagccattgccgatgccaacgatgaagcgcagctgggcgaactggaaacg
ctgggtgaactgacgaagatggcctgggagcatgatgtgcaggtgatgattgaaggtccg
ggccatgttccgctgcacggcgtgaaggaaaatatggagtgggaactggatgtctgccac
gaagctccgttttacacgctcggtccgctgaccaccgatgtggcaccgggctatgatcac
atcaccagcggcatcggcgcggcgaatatcggctggtacggctgcgcgatgctttgttat
gtgacgccgaaggagcacctgggtctgccgaataaagaggatgtgaaaacgggtgtgatc
acctataaaatcgcggctcatgctgcggatctggcgaaagggttccccggagcgcaggtg
cgtgataatgcactgagcaaagcgcggtttgaattccgctgggaggaccagttcaatctg
gcacttgatccggtgaccgcgcggtcgtaccacgattcaacgctgccgggcgaggaggcg
aaaaccgcgcatttctgctccatgtgcgggccgaagttctgctcgatgcggatctcggaa
gacgtgcgtcagtatgccgccgaacaggggctctccgaagaagaggccattgaaaaaggg
atgcaggaaaagtcgcaggaatttaccgagcagggtgccgagatttatacctag
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