Verrucomicrobia bacterium S94: EGM51_14160
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Entry
EGM51_14160 CDS
T05990
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
vbs
Verrucomicrobia bacterium S94
Pathway
vbs03030
DNA replication
vbs03430
Mismatch repair
vbs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vbs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EGM51_14160
03430 Mismatch repair
EGM51_14160
03440 Homologous recombination
EGM51_14160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vbs03032
]
EGM51_14160
03400 DNA repair and recombination proteins [BR:
vbs03400
]
EGM51_14160
Enzymes [BR:
vbs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EGM51_14160
DNA replication proteins [BR:
vbs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EGM51_14160
DNA repair and recombination proteins [BR:
vbs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EGM51_14160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
Motif
Other DBs
NCBI-ProteinID:
QBG48486
UniProt:
A0A4P6PK33
LinkDB
All DBs
Position
3221356..3224901
Genome browser
AA seq
1181 aa
AA seq
DB search
MNSVPFAHLHFHTCYSLLDSTAKVKDSVAAATDMGMQYLAMTDHAVLYGAVEFYKACYAA
GIKPIIGCDMYVARHGIAHRESMRDNMSLVLLAETQEGYENLVRLVSIAHLEGMYYKPRI
DKELLKKYSKGLIALSGDMRGEVAEACRNDDLKAAIDLALEYSGIMGKDNFFIELFDHGL
EEEKGLKEKLLQVAEATGLPIVATNDVHYIRQEHADAHDVLTCLQRGYLVADPNRYRYHG
DQYYMKSGEEMAELFKDHPEAISNTIEIAQRCNVEFFFPEKAEDLHFPKFPLPEGFSRDL
DYLIYLGKEGLRKLYGIEDLDNPKNDYEKEINERFYYEVGVIEKTNYINYFLVVADFIQW
ARGQGIPVGPGRGSGAGSLLAYSLAITTIEPLKYNLIFERFLNPDRVSPPDFDIDFCPTR
RQDVIQYVREKYGEECCAQIITFGTLGAKTLMRDLGRVLEIPLPYCDRLAKMIPDTPGTT
MEKALAESPEFKQATSTEPDALRIMKYARLLEGLPRHTGMHAAGVVIGEKPLIEIIPLTK
EAKEGLTVVQFEKGPTEEIGLLKMDFLGLKNLTIIYEACDLIKRNHGVEIDPEKLDIKDE
KTFELLARGDTVGVFQLESGGMRDTLRQVAPDCIEDIIAILALYRPGPMQFIPTYIKRKH
GQEKVEYDHPILEPILKETNGIIVYQEQIQQAAQKLAGFSLGQGDILRRAMGKKKPEVMA
EQRGKFVEGCKTTNNIDEKLANKIFDNITEFAKYGFNKSHSTAYGFVTYQTAWLKAHYPA
EFMAALLSGEMGNSDKLTQFIGEAKEMGIDVLPPSVNESIGHFNAVQDGSGIRFGLAAIK
GVGEGVVEEIVKERDENGPYLGLMDFCARVTSANKKVLESLIRSGAFDFSSAHRAQLFNG
IDIAIGRAAEALKDKASGQVSMFDMMADSEAEASSAGSDDELPDVKPWSESDMLAAEKEL
IGFFISGHPLARYEWVLDKFALKKVAEVGKLLPGTRTRCGGMVTEMRKLFTKKDQKPMAV
FKIEGLEGSINAIIFPGPFEQYGHLITEDATLMFGGTMMDEEGGDPKLQVMEIFPLDAAA
STFCDRISIHLPEIGVNEQVIADLKSTVQKFRGNIPLHICIEFAEGQKIFLNTDHDYKVR
PCAELVREIEQIIGEGTVFVAAKSDALKNPPKPRKWERKKG
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
gtgaacagtgtaccgtttgcccatcttcattttcatacctgctacagcctgctggacagt
acagcaaaggtgaaggattcggtggcggccgcaacggatatgggcatgcagtatctggcg
atgaccgaccatgcggtgctgtacggggcggtggaattttataaggcatgctacgccgcc
ggtatcaaaccgatcatcgggtgcgatatgtatgtggcgcggcacggcattgcccaccgc
gagtcgatgcgcgacaacatgagtctggtgctgctggcggaaacgcaggaaggctatgaa
aatctggtgcgcctcgtttccatcgcccacctcgaaggtatgtattacaagccgcgtatt
gataaggaactgctgaaaaaatacagcaaagggctgatcgcgctttcaggcgatatgcgc
ggcgaagtggcggaagcgtgccggaatgatgatctgaaagcagcaatcgatctggccctg
gaatattccggcatcatgggaaaagacaattttttcatcgagctcttcgaccatggcctg
gaggaggaaaaggggctaaaggaaaagctgctgcaggtggccgaagcaaccggtctgccg
attgttgccaccaatgatgttcactatatccggcaggagcatgccgacgcgcacgatgta
ttgacctgcctgcagcgcggctatctggtggcggacccgaaccggtaccgttaccatggc
gatcagtattatatgaaaagcggcgaggagatggccgaacttttcaaggatcatccggaa
gccatttccaataccattgaaattgcacagcgctgcaacgtggaattctttttcccggaa
aaggcggaggatcttcattttccaaagtttccgctgccggaaggtttctcccgtgatctc
gactatctgatttatctgggcaaagaaggattacgcaaactgtacggcatcgaagatctg
gacaacccgaaaaacgattacgaaaaggagatcaacgagcgcttttactacgaagtgggc
gtgatcgagaaaaccaactacatcaactattttctggtggtggccgactttattcagtgg
gcgcgcggccagggtattccggtcggtccgggccgcgggtcgggcgcgggatcgctgctc
gcctattcgctggcgattacgacgattgagccgctgaagtataacctgattttcgaacgg
ttcctgaatccggaccgtgtgtcaccgccggacttcgatatcgatttctgtccgacaaga
cgtcaggacgtcattcagtatgtgcgggagaaatacggggaggaatgctgcgcccagatc
atcaccttcggaacgctgggtgccaaaaccctgatgcgcgacctcggccgcgtactggaa
attcccctgccctactgcgaccgactggccaaaatgattccggatacgccggggaccacc
atggaaaaggccctggcggaaagtccggaattcaaacaggccaccagtacggaacccgac
gccctgcgtattatgaaatatgcccgactgctggagggactgccccggcatacgggaatg
cacgccgccggcgtggtgatcggcgaaaagccgctgatcgaaattattccgctgaccaaa
gaggccaaagaggggctgaccgtcgttcagtttgaaaaaggtcccaccgaggagatcggc
ctgttgaagatggacttcctcgggctgaaaaacctgaccatcatttatgaagcgtgcgat
ttgatcaaacgcaaccacggcgttgagatcgacccggaaaaactggatatcaaggacgaa
aaaacgttcgagcttctggcccgcggcgacacggtgggcgtattccagctggaatcgggc
ggcatgcgcgacaccctccggcaggtcgcaccggactgcattgaagacatcatcgccatt
ctggccctttaccgtccggggccgatgcagtttatcccaacctatatcaaacggaaacac
ggacaggaaaaagtcgaatacgaccacccgattcttgaaccgattctcaaagaaaccaac
ggcattatcgtttatcaggaacagattcagcaggccgcccagaaactcgccggtttctcg
ctcggccagggggatattctgcgccgcgccatgggtaaaaagaagccggaggtgatggcc
gagcagcgcggaaaattcgttgaagggtgcaaaacaaccaacaatatcgacgaaaaactc
gcgaataagattttcgacaatatcacggaattcgcgaaatacggttttaataaatcccac
tccactgcgtacggatttgtgacctatcagaccgcctggctgaaggcccactatcccgcc
gaatttatggcggccctgctctccggtgaaatgggcaactctgataaactgacccagttt
ataggtgaagccaaggagatgggcatcgatgttctgccgccgagcgtcaacgaatccatc
gggcattttaatgccgtgcaggacggcagcggcatccggttcggactcgccgccatcaaa
ggcgtcggcgaaggcgtggtggaggaaatcgtgaaagaacgcgatgaaaacgggccgtat
ctcggattgatggatttctgcgcccgcgtcaccagcgccaataaaaaggtgctggaaagt
ctgatccgctccggcgcattcgatttcagcagcgcgcaccgggcccagcttttcaacggt
attgatattgccatcggccgcgccgccgaagccctgaaggataaggcgtccggtcaggtg
tcgatgttcgatatgatggccgacagcgaagccgaagccagctcggcgggttccgacgac
gagctgccggatgtaaaaccctggagcgaatccgatatgctggccgccgaaaaagagctg
attggcttctttatttccggtcacccgctggcccgctatgaatgggtgctcgataaattt
gctctgaaaaaggtggctgaagtcggcaaactgctgccgggaactcggacgcgctgtggt
gggatggttacggaaatgcgcaagcttttcacgaagaaggaccagaaaccgatggccgtt
tttaaaatcgaagggctcgaaggctccattaatgccatcattttcccgggaccgtttgag
cagtacggccacctgattaccgaagacgccacactgatgttcggcggaaccatgatggac
gaggaaggcggcgacccgaaactccaggttatggaaatctttccgctcgatgccgccgca
tcaaccttctgcgaccggataagcatccatcttccggaaatcggggtgaatgaacaggtg
attgccgacctgaaaagcaccgttcagaaattccgcggcaatattcccctgcacatctgt
attgaatttgccgaaggacagaagatttttctgaataccgatcacgattacaaagttcgc
ccctgcgccgaactggtgcgtgaaatcgaacagattatcggtgaaggaaccgtgtttgtt
gcggccaaatccgatgccctcaaaaacccgccgaaaccgcggaaatgggagcggaaaaaa
ggataa
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