KEGG   Verrucomicrobia bacterium S94: EGM51_15045
Entry
EGM51_15045       CDS       T05990                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
vbs  Verrucomicrobia bacterium S94
Brite
KEGG Orthology (KO) [BR:vbs00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vbs03032]
    EGM51_15045
   03036 Chromosome and associated proteins [BR:vbs03036]
    EGM51_15045
   03400 DNA repair and recombination proteins [BR:vbs03400]
    EGM51_15045
DNA replication proteins [BR:vbs03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    EGM51_15045
Chromosome and associated proteins [BR:vbs03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    EGM51_15045
DNA repair and recombination proteins [BR:vbs03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      EGM51_15045
SSDB
Motif
Pfam: Bac_DNA_binding DUF7342
Other DBs
NCBI-ProteinID: QBG48654
UniProt: A0A4V0ZHG1
LinkDB
Position
complement(3413492..3413770)
AA seq 92 aa
MGKPMTKSQIIAAVAEKADISKAQAKDALEGLAELAYEGAADGFTIPGIGKLVKVERAAR
QGRNPATGETIQIPAKTVLKFRIAKAAKDAVL
NT seq 279 nt   +upstreamnt  +downstreamnt
atgggaaaacctatgaccaaatcgcaaatcatcgcagccgttgctgaaaaagcagatatt
tctaaagctcaggccaaagacgccctcgaaggcctcgccgaactcgcatacgaaggtgcc
gctgacggcttcaccatccccggcatcggcaaactggttaaagttgaacgtgctgcacgt
cagggccgtaacccggctaccggtgaaaccattcagattccggctaaaaccgtgctgaaa
ttccgcatcgcgaaagctgcaaaagacgcagtactctaa

DBGET integrated database retrieval system