Verrucomicrobia bacterium S94: EGM51_16305
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Entry
EGM51_16305 CDS
T05990
Name
(GenBank) hypothetical protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
vbs
Verrucomicrobia bacterium S94
Brite
KEGG Orthology (KO) [BR:
vbs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vbs03400
]
EGM51_16305
DNA repair and recombination proteins [BR:
vbs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EGM51_16305
Archaeal homologous recombinant proteins
EGM51_16305
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SbcC_Walker_B
SMC_N
AAA_29
AAA_23
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-ProteinID:
QBG48885
LinkDB
All DBs
Position
complement(3706594..3710106)
Genome browser
AA seq
1170 aa
AA seq
DB search
MKILELRFKNINSLYGEWCIDFTDPDFAADGLFAITGATRSGKTTILDALCLALYGQTPR
LGKMTQSDNEVMSRQTGDCFAEVLFEAASGTFRATWHQHRSRKKAGAALQAPRREVAKAD
GTLLAEKLKDVQEQIDSITGMSFDRFTRSILLAQGSFDTFLKADADERSPILEQITGTEI
YSEISKAVHQRNSAENRVLSELKAGLGGIALLSEDELEQIGFDLKRLEEKHRTETKKRDA
AKAALDWLARIETLEKDLETNRAEQKLWRIENEAFQPEAERLALAKRARPLDVEHLKLVN
LRNLRSEIETDLKDANKALPELDKQYKEATDALNACTEQLEETTKAQRELAPVLKQVRAL
DTTIAERSASLEKEAEQIAELQNEQIALQSKETENRAKLAQRQTELLEAATYQETHPQDA
ALVGQLAAIFQSLEQLKALEADQTEARSEAEAADAAAKTAADTAKTAAEQLAAAQEQCAQ
AETALTAVNTDLETACAGQSFAEWQTRLNELQRRFKLEKQGTENRNALSAKTAEVQTITD
ELAQKINEQTGLQREQELLLQNLQLRREIESLEAQRSELIDGQPCPLCGALEHPYASKLP
KPETDSIDKVNAALSTLAEQINTLTGKRAAAEAQSQTLRESIERDEAELQTLAAGTADEA
DEIAGRIERIKTLEQTLAEAKDAFDTARARLSEQRLAEQTAQQTAASAEEKREAAERRKT
ETAERFAKAESKLFQTLEPYGIESQETTAEQLKARRDRWVDSEKQSADLKQAIAHLETTL
ANQSEQLDNLKHRHRELTKRIHEQQSSLTQLITDRQTQFGDRQPDKVEHEHQTALDTARA
THDAARQHQHQIEQTRTRVREKIRTLEENRQTNAAELAEQESLFFQTLDTAGFEDEAAYL
AARLTESEQTELEKRADELKQRQIQLTALETEKVKQLQAERAQKHMETSPEEYAELSDSC
IALQQEIGGLKDRIKANEQAQTRHAEKLAEIEKQQTECHRWNTLHELIGSADGKKFRNFA
QGLTFELMVSHANRQLAKMSDRYLLIRDIEKPLDLNVVDNYQAGEIRPVKNLSGGESFIV
SLSLALGLSKMASKQIRVDSLFLDEGFGTLDEDALETALEALAELKQDGKLIGVISHVGA
LKERIGTQINVHTTSGGRSRLSGTGVSSPS
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatactcgaactgcgctttaagaatatcaactcgctgtatggcgaatggtgtatt
gattttacagatccggattttgcggcggacgggctgtttgcgattacgggggcgacgaga
tcggggaagacgacgattctggatgcgctctgtctggcactgtacggccagacgccgcgg
ctgggtaaaatgacgcagagcgataatgaagtgatgtcgcggcagacgggcgactgtttt
gcggaggtattatttgaagccgcctcgggaacctttcgcgcaacgtggcatcagcatcgc
tcgcgcaaaaaagcgggcgcggcgctgcaggcgcccagacgcgaagtggcgaaggccgac
ggaacccttctggcggaaaagctgaaagacgtgcaggagcagattgattcgattacgggc
atgagcttcgaccgctttacccgctcgatcctgctggcgcagggcagcttcgataccttt
ctgaaagccgatgccgatgagcgttcaccgattctggaacagattaccggcaccgaaatc
tattccgaaatttcaaaggcggtacatcaacgcaacagcgccgaaaaccgggtattgagt
gaattaaaggccgggctcggcggcattgcattgctcagtgaagacgagctcgaacaaatc
ggatttgatctgaagcggctggaagaaaaacaccggaccgaaacgaaaaagcgcgatgcc
gccaaagctgcactggattggcttgcacgtattgaaacgctggaaaaagatctggaaacc
aatcgcgcggagcagaaactctggcgcatcgaaaacgaggcctttcagccggaagccgaa
cggctcgcactggcaaagcgcgcccggccgctggatgtcgaacaccttaaactcgtcaac
ctgcgtaatcttcgctcggaaatagaaaccgatttgaaggacgccaacaaagccctcccc
gaactggacaagcaatacaaagaggcgaccgacgcactgaacgcctgcaccgaacagctg
gaagaaacaacaaaggcgcaacgggagctggctccggttctgaaacaggtgcgtgcgctc
gacaccactattgccgagcgctcggcctcactcgagaaagaggcggaacagatcgccgaa
ttgcagaacgaacagatcgcgctgcagagcaaagaaactgaaaaccgggcaaagcttgcg
cagcgccaaacggaactcctcgaagccgcaacctatcaggaaacgcacccgcaggacgcc
gcattggtcggtcaactcgccgcgatcttccaatccctggaacaattgaaagcactggag
gccgatcaaactgaagcccgttccgaagccgaagctgcggacgctgccgcaaaaacggcc
gctgataccgccaagaccgcggctgaacaactggccgcggcacaagaacaatgtgcgcag
gcagaaaccgcgctcaccgccgtcaacaccgatctggaaacggcctgcgccggacaatcc
ttcgcggaatggcaaacccggctgaatgaacttcagcggcggtttaaactggaaaaacag
gggactgaaaaccggaacgcgctgagcgcaaaaaccgccgaagtccaaacaatcaccgac
gaactggcccaaaaaattaacgaacagaccggactgcaacgcgagcaggagctcctgctc
cagaatctgcagttgcgtcgggaaatagaaagtctggaagcacagcgtagcgaactgatc
gacggccaaccctgcccgctctgcggcgcactggagcacccgtacgcctccaaactccct
aagccggaaaccgattccatcgataaagtcaatgcggcgctttcaacgcttgcagagcag
atcaatacactgaccggaaagcgggccgccgccgaggcgcaatctcaaacgctccgggaa
tccatagaacgcgatgaagccgaactgcagacgctggcagcaggtaccgccgatgaagcc
gacgaaatcgccggacgcattgagcggattaaaacgctggagcaaaccctggccgaagcc
aaggatgctttcgataccgcccgcgcaagactgagcgaacaacggcttgctgaacaaacc
gcacagcagaccgccgcatcggccgaggaaaaacgcgaagccgcggaacgccggaaaacg
gaaaccgccgaacggttcgcaaaggcggaatcgaaacttttccaaaccctggaaccctat
ggtattgaatcgcaggaaaccaccgcagaacaattgaaagcacgacgcgatcgatgggtg
gatagcgaaaagcagtcggccgatctcaaacaagccatcgcgcacctcgaaacgacgctc
gcaaatcagtcggaacaactggataacctgaagcaccgccatagggaattgacgaaacgg
attcatgaacagcagtcctccttgacccaattaattaccgatcggcaaacccagttcggc
gaccgccagccggataaagtggaacacgagcatcaaaccgcactggataccgcccgcgca
acccacgacgccgcacggcagcaccagcatcagattgaacaaacgcggactcgggtgcgg
gaaaaaatccggaccctggaagaaaaccggcaaacaaacgcagcagagctcgccgaacag
gagtcactttttttccagacgctggacaccgccggttttgaagatgaagcagcctatctt
gccgcccggctcacggagtccgaacagaccgaactggaaaaacgagccgacgaactgaaa
caacggcagatccagctcacggcactggaaacggaaaaagtgaaacagcttcaggcggag
cgggcacaaaagcatatggaaacctcgcccgaagaatatgcggaactctcggactcctgc
atcgccctgcagcaggaaatcggcggactgaaagaccggattaaagccaacgaacaggca
cagacacgccatgcggaaaaactggcggaaattgaaaagcagcaaactgagtgccatcgg
tggaatacactgcacgagctgatcggatcggccgacggcaaaaagttccgcaatttcgcg
cagggactgacttttgaattaatggtctcgcacgccaaccggcagctggccaaaatgagc
gatcgctacctgctcatccgcgacatcgagaaaccgctcgaccttaatgtggtggataac
tatcaggccggcgaaatccgcccggttaaaaatctgtccggcggtgaaagttttatcgtc
agcctctcgctggcgctgggcctctccaaaatggcaagcaaacagatccgagtggactcg
ctctttctcgacgaaggtttcggcacgctcgacgaagacgcactcgaaaccgcgctggaa
gcactggccgaattaaaacaggatggaaaactgatcggtgtcatctcgcacgtcggcgcg
ttgaaagaacgcatcggcacacagatcaatgtgcataccaccagcggcggccgcagtcga
ttgagcggaaccggtgtttccagccccagttaa
DBGET
integrated database retrieval system